RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 HDAC8Q9BY41 377 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 POTEKPQ9BYX7 375 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 COMMD4Q9H0A8 199 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 ALX4Q9H161 411 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 PRDM9Q9NQV7 894 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 PHPT1Q9NRX4 125 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 DAPP1Q9UN19 280 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 TRAV8-7A0A075B6U6 113 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 A0A087WV62 115 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 TMEM82A0PJX8 343 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 OR5H14A6NHG9 310 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 ZNF860A6NHJ4 632 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 BCL2L11O43521 198 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 NARSO43776 548 aaKnown RBP9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 OR2F2O95006 317 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 ACTBP60709 375 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 ACTG1P63261 375 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 OR2F1Q13607 317 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 RAB11FIP2Q7L804 512 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 ZNF676Q8N7Q3 588 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 ZNF511Q8NB15 262 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 OR51D1Q8NGF3 324 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 TMEM106AQ96A25 262 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 CCDC74AQ96AQ1 378 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 VRK1Q99986 396 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 USB1Q9BQ65 265 aaKnown RBP9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 FRRS1LQ9P0K9 344 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 IKZF2Q9UKS7 526 aa9.06□□□□□ -0.96
TRAPPC2-201ENST00000359680 TRBV5-5A0A0J9YX44 114 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 URADA6NGE7 173 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 H3BSH0 61 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 GPR31O00270 319 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 CDC40O60508 579 aaKnown RBP eCLIP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ADAM11O75078 769 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ZNF432O94892 652 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 PVALBP20472 110 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ZNF10P21506 573 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 RORAP35398 523 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ACAA2P42765 397 aaKnown RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 GPR143P51810 404 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 SNRPNP63162 240 aaKnown RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ZNF345Q14585 488 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 LRRC37A5PQ49AS3 106 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 LY6G6FQ5SQ64 297 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ZNF684Q5T5D7 378 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 JMJD6Q6NYC1 403 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 TMEM88Q6PEY1 159 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 OR2W3Q7Z3T1 314 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 JAZF1Q86VZ6 243 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 OR4E2Q8NGC2 313 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 EDAQ92838 391 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ZNF707Q96C28 371 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 PHYHIPLQ96FC7 376 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 RBM18Q96H35 190 aaKnown RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ZNF75AQ96N20 296 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 NMNAT2Q9BZQ4 307 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 TRPV4Q9HBA0 871 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ZDHHC4Q9NPG8 344 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 POLE3Q9NRF9 147 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 DNAJB12Q9NXW2 375 aaKnown RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 DEC1Q9P2X7 70 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ZNF230Q9UIE0 474 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ZNF337Q9Y3M9 751 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 SLC22A7Q9Y694 548 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 NOTCH4Q99466 2003 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 SCAMP1O15126 338 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ARPC3O15145 178 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 SMAD9O15198 467 aaKnown RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 SRPX2O60687 465 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 DNAJB6O75190 326 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 UPK3AO75631 287 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 CD8AP01732 235 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ITGB2P05107 769 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 H2AFB1P0C5Y9 115 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 POU3F4P49335 361 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 EFNB2P52799 333 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 TAS2R19P59542 299 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 PPIAP62937 165 aaKnown RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 UBE2IP63279 158 aaKnown RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 SNTB1Q13884 538 aaKnown RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 TAF13Q15543 124 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 ODF4Q2M2E3 257 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 PAN3Q58A45 887 aaKnown RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 EXOSC6Q5RKV6 272 aaKnown RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 KIRREL2Q6UWL6 708 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 SLC16A9Q7RTY1 509 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 GABRG1Q8N1C3 465 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 NT5CQ8TCD5 201 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 PXYLP1Q8TE99 480 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 LCN9Q8WX39 176 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 FGF13Q92913 245 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 RNF166Q96A37 237 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 SLC25A28Q96A46 364 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 C1orf198Q9H425 327 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 MRM2Q9UI43 246 aaKnown RBP9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 SPACA6W5XKT8 324 aa9.05□□□□□ -0.96
TRAPPC2-201ENST00000359680 RAB3DO95716 219 aa9.04□□□□□ -0.96
TRAPPC2-201ENST00000359680 DLSTP36957 453 aa9.04□□□□□ -0.96
TRAPPC2-201ENST00000359680 RAB13P51153 203 aa9.04□□□□□ -0.96
TRAPPC2-201ENST00000359680 HTRA4P83105 476 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms