RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 KDM8Q8N371 416 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 SLC30A7Q8NEW0 376 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 TUBB1Q9H4B7 451 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 ZNF587BE7ETH6 402 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 ABHD16AO95870 558 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 OR2T7P0C7T2 308 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 ZNF705AQ6ZN79 300 aaPredicted RBP16.99■□□□□ 0.31
SHANK1-202ENST00000359082 AGBL5Q8NDL9 886 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 OR2T27Q8NH04 317 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 ADAM19Q9H013 955 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 HSFX1Q9UBD0 423 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 NXT1Q9UKK6 140 aaKnown RBP16.99■□□□□ 0.31
SHANK1-202ENST00000359082 ZNF814B7Z6K7 855 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 EPHA5P54756 1037 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 GABREP78334 506 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 MISPQ8IVT2 679 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 CHTF18Q8WVB6 975 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 E9PI62 339 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 HCRTR1O43613 425 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 IMPA1P29218 277 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 GIPRP48546 466 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 PHLDA2Q53GA4 152 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 MARCH8Q5T0T0 291 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 OR52I1Q8NGK6 324 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 TAZQ16635 292 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 GLYR1Q49A26 553 aaPredicted RBP16.99■□□□□ 0.31
SHANK1-202ENST00000359082 RASD2Q96D21 266 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 CCL26Q9Y258 94 aa16.99■□□□□ 0.31
SHANK1-202ENST00000359082 SCG5P05408 212 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 NDUFA6P56556 154 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 FOXK2Q01167 660 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 PGBD5Q8N414 524 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 LCORQ96JN0 433 aaPredicted RBP16.98■□□□□ 0.31
SHANK1-202ENST00000359082 MED17Q9NVC6 651 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 NECAP2Q9NVZ3 263 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 GMPR2Q9P2T1 348 aaKnown RBP16.98■□□□□ 0.31
SHANK1-202ENST00000359082 CCR6P51684 374 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 GNB1P62873 340 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 MRPS21P82921 87 aaKnown RBP16.98■□□□□ 0.31
SHANK1-202ENST00000359082 REEP5Q00765 189 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 ALKBH1Q13686 389 aaKnown RBP16.98■□□□□ 0.31
SHANK1-202ENST00000359082 BAGE3Q86Y29 109 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 BAGE2Q86Y30 109 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 SLC35G3Q8N808 338 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 DCLRE1CQ96SD1 692 aaKnown RBP16.98■□□□□ 0.31
SHANK1-202ENST00000359082 FN3KRPQ9HA64 309 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 PRSS16Q9NQE7 514 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 TRAF3IP2O43734 574 aaPredicted RBP16.98■□□□□ 0.31
SHANK1-202ENST00000359082 GDF7Q7Z4P5 450 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 NRARPQ7Z6K4 114 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 OR10K1Q8NGX5 313 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 CENPOQ9BU64 300 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 ABHD6Q9BV23 337 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 TBC1D28Q2M2D7 210 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 GGTA1PQ4G0N0 100 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 PFN4Q8NHR9 129 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 PDLIM5Q96HC4 596 aaKnown RBP16.98■□□□□ 0.31
SHANK1-202ENST00000359082 C20orf85Q9H1P6 137 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 CDCP1Q9H5V8 836 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 LRIT2A6NDA9 550 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 HS3ST1O14792 307 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 FURINP09958 794 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 Q499Y3 187 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 FAM199XQ6PEV8 388 aaPredicted RBP16.98■□□□□ 0.31
SHANK1-202ENST00000359082 EMG1Q92979 244 aaKnown RBP16.98■□□□□ 0.31
SHANK1-202ENST00000359082 TMEM106AQ96A25 262 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 OR52A5Q9H2C5 316 aa16.98■□□□□ 0.31
SHANK1-202ENST00000359082 MBLAC1A4D2B0 266 aaPredicted RBP16.97■□□□□ 0.31
SHANK1-202ENST00000359082 C17orf67Q0P5P2 114 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 SLC22A24Q8N4F4 322 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 PLPP7Q8NBV4 271 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 KCNG3Q8TAE7 436 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 TM4SF18Q96CE8 201 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 PDCD1LG2Q9BQ51 273 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 CXorf36Q9H7Y0 433 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 SIT1Q9Y3P8 196 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 DOT1LQ8TEK3 1739 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 NAGAP17050 411 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 ELAVL4P26378 380 aaKnown RBP16.97■□□□□ 0.31
SHANK1-202ENST00000359082 WDR5BQ86VZ2 330 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 VRK3Q8IV63 474 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 ZMAT3Q9HA38 289 aaKnown RBP16.97■□□□□ 0.31
SHANK1-202ENST00000359082 CCDC88AQ3V6T2 1871 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 TMEM189-UBE2V1I3L0A0 370 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 PGAP1Q75T13 922 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 STMND1H3BQB6 276 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 DEFA6Q01524 100 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 CD300LGQ6UXG3 332 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 SIAH3Q8IW03 269 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 LRRC56Q8IYG6 542 aaPredicted RBP16.97■□□□□ 0.31
SHANK1-202ENST00000359082 HLA-CQ95604 372 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 GFRA2O00451 464 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 GPRIN2O60269 458 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 LGALS4P56470 323 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 NXNL2Q5VZ03 156 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 OLIG3Q7RTU3 272 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 CATSPERDQ86XM0 798 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 NANPQ8TBE9 248 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 PRR14Q9BWN1 585 aa16.97■□□□□ 0.31
SHANK1-202ENST00000359082 TMEM221A6NGB7 291 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms