RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 LDAHQ9H6V9 325 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 RPRD1BQ9NQG5 326 aaKnown RBP13.95□□□□□ -0.18
CTSA-202ENST00000354880 ASB6Q9NWX5 421 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 RASD1Q9Y272 281 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 CCDC182A6NF36 153 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 A6NIZ1 184 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 H7C1C5 153 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 TFECO14948 347 aaPredicted RBP13.94□□□□□ -0.18
CTSA-202ENST00000354880 RAMP1O60894 148 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 VAMP5O95183 116 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 APOL3O95236 402 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 ITGB2P05107 769 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 ZNF43P17038 809 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 SPI1P17947 270 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 DCKP27707 260 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 ATP6V1E1P36543 226 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 EIF1AXP47813 144 aaKnown RBP13.94□□□□□ -0.18
CTSA-202ENST00000354880 SLC25A1P53007 311 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 RAP1BP61224 184 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 LCN6P62502 163 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 RAP1AP62834 184 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 LGALS3BPQ08380 585 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 NHLRC1Q6VVB1 395 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 B3GLCTQ6Y288 498 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 Q6ZS92 163 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 SATL1Q86VE3 508 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 NEIL3Q8TAT5 605 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 ASB10Q8WXI3 467 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 UCN2Q96RP3 112 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 CDCA4Q9BXL8 241 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 FGF20Q9NP95 211 aaPredicted RBP13.94□□□□□ -0.18
CTSA-202ENST00000354880 TIGARQ9NQ88 270 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 MED29Q9NX70 200 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 DIMT1Q9UNQ2 313 aaKnown RBP13.94□□□□□ -0.18
CTSA-202ENST00000354880 LIPGQ9Y5X9 500 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 TRGV5A0A0B4J1U4 118 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 IGHV3-15A0A0B4J1V0 119 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 PRSS37A4D1T9 235 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 CXCL13O43927 109 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 RAB36O95755 333 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 ACTL6AO96019 429 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 ADRA2AP08913 450 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 ZNF708P17019 499 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 JUNBP17275 347 aaPredicted RBP13.94□□□□□ -0.18
CTSA-202ENST00000354880 ENPP1P22413 925 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 GSTT1P30711 240 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 MAP2K4P45985 399 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 CLDN18P56856 261 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 C1DQ13901 141 aaKnown RBP13.94□□□□□ -0.18
CTSA-202ENST00000354880 PON3Q15166 354 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 SLC35D3Q5M8T2 416 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 FAM205BPQ63HN1 556 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 OR51G2Q8NGK0 314 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 EXTL1Q92935 676 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 TXNDC15Q96J42 360 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 SYT4Q9H2B2 425 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 EXO5Q9H790 373 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 ACOT13Q9NPJ3 140 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 HAO2Q9NYQ3 351 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 EXOGQ9Y2C4 368 aaKnown RBP13.94□□□□□ -0.18
CTSA-202ENST00000354880 CHD8Q9HCK8 2581 aa13.94□□□□□ -0.18
CTSA-202ENST00000354880 A6NHS1 94 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 C1QTNF9BB2RNN3 333 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 K7EM74 188 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 SMAD9O15198 467 aaKnown RBP13.93□□□□□ -0.18
CTSA-202ENST00000354880 TRAF3IP2O43734 574 aaPredicted RBP13.93□□□□□ -0.18
CTSA-202ENST00000354880 C1QTNF9P0C862 333 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 RUNX1T1Q06455 604 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 IRF3Q14653 427 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 TBCEQ15813 527 aaPredicted RBP13.93□□□□□ -0.18
CTSA-202ENST00000354880 BCL2A1Q16548 175 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 LCN1P1Q5VSP4 162 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 VASNQ6EMK4 673 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 B3GNT6Q6ZMB0 384 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 SHFQ7M4L6 423 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 PM20D2Q8IYS1 436 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 MEIOBQ8N635 442 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 EXD3Q8N9H8 876 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 OR4F15Q8NGB8 312 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 OR51L1Q8NGJ5 315 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 OR2T4Q8NH00 348 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 C9orf43Q8TAL5 461 aaPredicted RBP13.93□□□□□ -0.18
CTSA-202ENST00000354880 SNRNP27Q8WVK2 155 aaKnown RBP13.93□□□□□ -0.18
CTSA-202ENST00000354880 FAR1Q8WVX9 515 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 CPNE4Q96A23 557 aaPredicted RBP13.93□□□□□ -0.18
CTSA-202ENST00000354880 ABHD17AQ96GS6 310 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 TSSK2Q96PF2 358 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 VSX1Q9NZR4 365 aaPredicted RBP13.93□□□□□ -0.18
CTSA-202ENST00000354880 KLHL13Q9P2N7 655 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 ZZEF1O43149 2961 aa13.93□□□□□ -0.18
CTSA-202ENST00000354880 A0A087WV48 116 aa13.92□□□□□ -0.18
CTSA-202ENST00000354880 BIDP55957 195 aa13.92□□□□□ -0.18
CTSA-202ENST00000354880 SRYQ05066 204 aa13.92□□□□□ -0.18
CTSA-202ENST00000354880 POU4F3Q15319 338 aa13.92□□□□□ -0.18
CTSA-202ENST00000354880 RNLSQ5VYX0 342 aa13.92□□□□□ -0.18
CTSA-202ENST00000354880 RBMXL3Q8N7X1 1067 aaKnown RBP13.92□□□□□ -0.18
CTSA-202ENST00000354880 RORBQ92753 470 aa13.92□□□□□ -0.18
CTSA-202ENST00000354880 TMIGD2Q96BF3 282 aa13.92□□□□□ -0.18
CTSA-202ENST00000354880 ZMYND19Q96E35 227 aaPredicted RBP13.92□□□□□ -0.18
CTSA-202ENST00000354880 SRA1Q9HD15 236 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms