RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PADI1Q9ULC6 663 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 FKBP7Q9Y680 259 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 V9GYH0 126 aa6.24□□□□□ -1.41
TRIM55-203ENST00000350034 DOPEY1Q5JWR5 2465 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 SMG1Q96Q15 3661 aaKnown RBP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 CEP250Q9BV73 2442 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 IGLV1-36A0A0B4J1U3 117 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 A0A1W2PNU3 283 aaPredicted RBP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 PRSS37A4D1T9 235 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 CD8B2A6NJW9 211 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 LIPT2A6NK58 231 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 MS4A18H0YCH9 400 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 DVL2O14641 736 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 TP53I11O14683 189 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 TERTO14746 1132 aaKnown RBP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 TRIM3O75382 744 aaPredicted RBP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 ITGA10O75578 1167 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 CD8BP10966 210 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 IMPDH2P12268 514 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 ALOX5APP20292 161 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 ADH6P28332 368 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 CENPAP49450 140 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 GBX2P52951 348 aaPredicted RBP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 RPS11P62280 158 aaKnown RBP eCLIP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 SIRPAP78324 504 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 RUNX1T1Q06455 604 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 CHAF1BQ13112 559 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 HNRNPA0Q13151 305 aaKnown RBP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 ACKR1Q16570 336 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 MS4A18Q3C1V0 323 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 GLYR1Q49A26 553 aaPredicted RBP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 TP53I3Q53FA7 332 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 SLC6A19Q695T7 634 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 H3F3CQ6NXT2 135 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 RPL22L1Q6P5R6 122 aaKnown RBP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 POMZP3Q6PJE2 187 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 LYPD4Q6UWN0 246 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 C6orf15Q6UXA7 325 aaPredicted RBP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 H1FNTQ75WM6 255 aaPredicted RBP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 TRILQ7L0X0 811 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 RAB11FIP2Q7L804 512 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 KCTD20Q7Z5Y7 419 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 SNX29P2Q8IUI4 249 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 NAXDQ8IW45 347 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 GHDCQ8N2G8 530 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 WDSUB1Q8N9V3 476 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 ADPRHL1Q8NDY3 354 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 NEIL3Q8TAT5 605 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 ZNF417Q8TAU3 575 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 HAVCR2Q8TDQ0 301 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 PAQR8Q8TEZ7 354 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 CT55Q8WUE5 264 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 PHYHIPQ92561 330 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 AP3S1Q92572 193 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 SLC25A36Q96CQ1 311 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 SMIM19Q96E16 107 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 ARL5BQ96KC2 179 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 ZNF587Q96SQ5 575 aaPredicted RBP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 ATF6BQ99941 703 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 SOSTQ9BQB4 213 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 CCDC32Q9BV29 185 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 ANGPTL4Q9BY76 406 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 STRADBQ9C0K7 418 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 PPIL3Q9H2H8 161 aaKnown RBP6.23□□□□□ -1.41
TRIM55-203ENST00000350034 KCNN2Q9H2S1 579 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 METTL7AQ9H8H3 244 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 PROK2Q9HC23 129 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 KLRF1Q9NZS2 232 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 KLHL13Q9P2N7 655 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 METRNQ9UJH8 293 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 B9D1Q9UPM9 204 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 KLHDC2Q9Y2U9 406 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 CMAHPQ9Y471 501 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 PCDHGA1Q9Y5H4 931 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 R4GN57 208 aa6.23□□□□□ -1.41
TRIM55-203ENST00000350034 NBEAQ8NFP9 2946 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 A0A087WZY1 265 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 NSG1A0A0A6YYJ2 146 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 TRAV1-2A0A0B4J238 106 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 A0A0G2JK05 382 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 A0A1W2PNV4 684 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 A0A1W2PRG6 482 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 SLC22A23A1A5C7 686 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 PMS2P1A4D2B8 440 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 ANKRD33BA6NCL7 494 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 ANKRD61A6NGH8 418 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 A6NIZ1 184 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 HSPB2A8KAH6 182 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 FAM171A2A8MVW0 826 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 C9orf172C9J069 976 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 C11orf98E9PRG8 122 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 H7C1C5 153 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 CASKO14936 926 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 SNPHO15079 494 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 MAGEB3O15480 346 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 MAGEB4O15481 346 aaPredicted RBP6.22□□□□□ -1.41
TRIM55-203ENST00000350034 ARHGEF9O43307 516 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 GPRIN2O60269 458 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 UPK3AO75631 287 aa6.22□□□□□ -1.41
TRIM55-203ENST00000350034 GATBO75879 557 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms