RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TSPAN5P62079 268 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 LINC00303Q3SY05 128 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 FAAP20Q6NZ36 180 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 FAM160A2Q8N612 972 aaPredicted RBP13.97□□□□□ -0.17
BRCC3-201ENST00000330045 ZNF615Q8N8J6 731 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 C15orf40Q8WUR7 153 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 NSMAFQ92636 917 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 ZNF578Q96N58 590 aaPredicted RBP13.97□□□□□ -0.17
BRCC3-201ENST00000330045 LMF1Q96S06 567 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 GAS2L1Q99501 681 aaPredicted RBP13.97□□□□□ -0.17
BRCC3-201ENST00000330045 MGAT4CQ9UBM8 478 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 FBXL3Q9UKT7 428 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 CA14Q9ULX7 337 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 ETV7Q9Y603 341 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 PRKNO60260 465 aaPredicted RBP13.97□□□□□ -0.17
BRCC3-201ENST00000330045 LDOC1O95751 146 aaPredicted RBP13.97□□□□□ -0.17
BRCC3-201ENST00000330045 CFDP00746 253 aaPredicted RBP13.97□□□□□ -0.17
BRCC3-201ENST00000330045 IFNGR1P15260 489 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 HPGDP15428 266 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 MNDAP41218 407 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 TAS2R20P59543 309 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 EIF2B5Q13144 721 aaKnown RBP13.97□□□□□ -0.17
BRCC3-201ENST00000330045 C1orf61Q13536 156 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 CD226Q15762 336 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 TCTE1Q5JU00 501 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 MEIOBQ8N635 442 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 PCNPQ8WW12 178 aaKnown RBP13.97□□□□□ -0.17
BRCC3-201ENST00000330045 RLN3Q8WXF3 142 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 MMP25Q9NPA2 562 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 TAS2R5Q9NYW4 299 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 MMP17Q9ULZ9 603 aa13.97□□□□□ -0.17
BRCC3-201ENST00000330045 TP53BP1Q12888 1972 aaPredicted RBP13.96□□□□□ -0.17
BRCC3-201ENST00000330045 TRBV5-5A0A0J9YX44 114 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 I3L521 148 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 M0R233 179 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 DCTN6O00399 190 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 SRPX2O60687 465 aaPredicted RBP13.96□□□□□ -0.17
BRCC3-201ENST00000330045 SEMA4FO95754 770 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 ABHD16AO95870 558 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 CTSEP14091 401 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 CPN1P15169 458 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 M6PRP20645 277 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 SMAD4Q13485 552 aaKnown RBP13.96□□□□□ -0.17
BRCC3-201ENST00000330045 MED25Q71SY5 747 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 LRRTM1Q86UE6 522 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 COMMD7Q86VX2 200 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 TMPRSS12Q86WS5 348 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 CDC20BQ86Y33 519 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 SPICQ8N5J4 248 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 UXS1Q8NBZ7 420 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 DNAAF1Q8NEP3 725 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 PHOSPHO1Q8TCT1 267 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 NARFLQ9H6Q4 476 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 FKRPQ9H9S5 495 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 GRHPRQ9UBQ7 328 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 ZNF69Q9UC07 566 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 LAMP5Q9UJQ1 280 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 IKZF2Q9UKS7 526 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 PPIEQ9UNP9 301 aaKnown RBP13.96□□□□□ -0.17
BRCC3-201ENST00000330045 MAB21L2Q9Y586 359 aa13.96□□□□□ -0.17
BRCC3-201ENST00000330045 A0A1B0GTH9 108 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 TVP23AA6NH52 213 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 PRAMEF26H0Y7S4 382 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 OIP5O43482 229 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 ASAH2BP0C7U1 165 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 ANXA7P20073 488 aaKnown RBP13.96□□□□□ -0.18
BRCC3-201ENST00000330045 ADH7P40394 386 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 RAB14P61106 215 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 CBFBQ13951 182 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 LRRN1Q6UXK5 716 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 PARGQ86W56 976 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 ADAMTS18Q8TE60 1221 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 CCDC74AQ96AQ1 378 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 PHF7Q9BWX1 381 aaPredicted RBP13.96□□□□□ -0.18
BRCC3-201ENST00000330045 UBQLN4Q9NRR5 601 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 PRODH2Q9UF12 536 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 CYP8B1Q9UNU6 501 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 PCDHGA5Q9Y5G8 931 aa13.96□□□□□ -0.18
BRCC3-201ENST00000330045 SDK1Q7Z5N4 2213 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 TEX51A0A1B0GUA7 166 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 CIB4A0PJX0 185 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 ANXA2P2A6NMY6 339 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 H7C1C5 153 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 CREBL2O60519 120 aaPredicted RBP13.95□□□□□ -0.18
BRCC3-201ENST00000330045 NSA2O95478 260 aaKnown RBP13.95□□□□□ -0.18
BRCC3-201ENST00000330045 TXNDC12O95881 172 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 MAS1P04201 325 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 ANXA2P07355 339 aaKnown RBP13.95□□□□□ -0.18
BRCC3-201ENST00000330045 TMIGD3P0DMS9 266 aaPredicted RBP13.95□□□□□ -0.18
BRCC3-201ENST00000330045 UBL4AP11441 157 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 LCN6P62502 163 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 EGR4Q05215 589 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 LTBQ06643 244 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 GRM7Q14831 915 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 FNDC7Q5VTL7 733 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 CBLN3Q6UW01 205 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 ZDHHC1Q8WTX9 485 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 THEM6Q8WUY1 208 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 LPAR4Q99677 370 aa13.95□□□□□ -0.18
BRCC3-201ENST00000330045 GPN1Q9HCN4 374 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms