RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 NSG1A0A0A6YYJ2 146 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 A8MVM7 634 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 DOK2O60496 412 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 BIDP55957 195 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 SEC61A1P61619 476 aaKnown RBP12.68□□□□□ -0.38
SPAST-201ENST00000315285 PRSS45Q7RTY3 260 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 ZFAND1Q8TCF1 268 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 RAB3CQ96E17 227 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 OR5B12Q96R08 314 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 SMIM3Q9BZL3 60 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 ISYNA1Q9NPH2 558 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 CHST2Q9Y4C5 530 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 ACTBL2Q562R1 376 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 CD276Q5ZPR3 534 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 EID2Q8N6I1 236 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 OR1S1Q8NH92 325 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 HMGCLL1Q8TB92 370 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 TCEAL3Q969E4 200 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 SEC22AQ96IW7 307 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 ZNF285Q96NJ3 590 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 ULBP3Q9BZM4 244 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 NRSN2Q9GZP1 204 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 MCTS1Q9ULC4 181 aaKnown RBP12.68□□□□□ -0.38
SPAST-201ENST00000315285 GDF1P27539 372 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 ATP1B3P54709 279 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 IHHQ14623 411 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 GLYATL3Q5SZD4 288 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 NKAIN2Q5VXU1 208 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 PLCXD3Q63HM9 321 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 ASTLQ6HA08 431 aaPredicted RBP12.68□□□□□ -0.38
SPAST-201ENST00000315285 MARCH3Q86UD3 253 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 RSC1A1Q92681 617 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 SELENOIQ9C0D9 397 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 P2RY10O00398 339 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 APLNRP35414 380 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 PAPD4Q6PIY7 484 aaKnown RBP12.67□□□□□ -0.38
SPAST-201ENST00000315285 OVCH1Q7RTY7 1134 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 PRR18Q8N4B5 295 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 OR2A1Q8NGT9 310 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 ZFPM2Q8WW38 1151 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 SLC6A18Q96N87 628 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 TSPAN10Q9H1Z9 355 aaPredicted RBP12.67□□□□□ -0.38
SPAST-201ENST00000315285 MUTYHQ9UIF7 546 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 SLC22A23A1A5C7 686 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 A6NCN8 305 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 B4DXG7 233 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 EFNA3P52797 238 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 LPAL2Q16609 132 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 PRAMEF20Q5VT98 475 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 LIPNQ5VXI9 398 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 DNAAF1Q8NEP3 725 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 OR6M1Q8NGM8 313 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 KCNG3Q8TAE7 436 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 RSPRY1Q96DX4 576 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 TMEM43Q9BTV4 400 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 KCNJ16Q9NPI9 418 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 LOC100289279A0A1B0GTE1 492 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 UPK1AO00322 258 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 ETV6P41212 452 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 CLDN17P56750 224 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 FABP5Q01469 135 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 ECH1Q13011 328 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 KIAA0040Q15053 153 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 Q6ZTK2 550 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 PLPP7Q8NBV4 271 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 PATE1Q8WXA2 126 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 MIB2Q96AX9 1013 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 SEC22CQ9BRL7 303 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 ENKD1Q9H0I2 346 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 MRPS28Q9Y2Q9 187 aaKnown RBP12.67□□□□□ -0.38
SPAST-201ENST00000315285 GPR55Q9Y2T6 319 aaPredicted RBP12.67□□□□□ -0.38
SPAST-201ENST00000315285 ABCA3Q99758 1704 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 ANKRD30BLA7E2S9 258 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 PRKACBP22694 351 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 PCBD1P61457 104 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 CDC20Q12834 499 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 C1orf140Q5VVS0 124 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 CAMKMTQ7Z624 323 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 LRRC18Q8N456 261 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 SLC22A24Q8N4F4 322 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 BBS1Q8NFJ9 593 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 RHBDD1Q8TEB9 315 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 DVL3Q92997 716 aaPredicted RBP12.67□□□□□ -0.38
SPAST-201ENST00000315285 CNRIP1Q96F85 164 aaPredicted RBP12.67□□□□□ -0.38
SPAST-201ENST00000315285 CMSS1Q9BQ75 279 aaKnown RBP12.67□□□□□ -0.38
SPAST-201ENST00000315285 SLCO5A1Q9H2Y9 848 aa12.67□□□□□ -0.38
SPAST-201ENST00000315285 KCNK2O95069 426 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 MT-ATP6P00846 226 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 HIST1H1CP16403 213 aaKnown RBP12.66□□□□□ -0.38
SPAST-201ENST00000315285 CD1CP29017 333 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 RPL35P42766 123 aaKnown RBP12.66□□□□□ -0.38
SPAST-201ENST00000315285 ELSPBP1Q96BH3 223 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 GLTPQ9NZD2 209 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 ANKRD33BA6NCL7 494 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 LIX1LQ8IVB5 337 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 KLHDC8BQ8IXV7 354 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 RNF128Q8TEB7 428 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 PIGCQ92535 297 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 ARSGQ96EG1 525 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 METTL9Q9H1A3 318 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms