RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SERPINA12Q8IW75 414 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 OR6Q1Q8NGQ2 317 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 TMEM106AQ96A25 262 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 SARGQ9BW04 601 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 CACNG6Q9BXT2 260 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 PLA2G12AQ9BZM1 189 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 ZNF701Q9NV72 531 aaPredicted RBP12.47□□□□□ -0.41
DDX54-202ENST00000314045 MRPL15Q9P015 296 aaKnown RBP12.47□□□□□ -0.41
DDX54-202ENST00000314045 CES1P1Q9UKY3 287 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 EXO1Q9UQ84 846 aaKnown RBP12.47□□□□□ -0.41
DDX54-202ENST00000314045 TMEM184BQ9Y519 407 aaPredicted RBP12.47□□□□□ -0.41
DDX54-202ENST00000314045 A0A0B4J2E0 115 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 A0A1B0GX12 115 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 OR6C70A6NIJ9 312 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 SPI1P17947 270 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 RAB3AP20336 220 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 SHC1P29353 583 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 GABREP78334 506 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 SPOCK1Q08629 439 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 DMWDQ09019 674 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 OGFOD3Q6PK18 319 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 SLC16A9Q7RTY1 509 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 TMEM99Q8N816 258 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 ZSCAN4Q8NAM6 433 aaPredicted RBP12.46□□□□□ -0.41
DDX54-202ENST00000314045 BBS1Q8NFJ9 593 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 SYNPO2LQ9H987 977 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 MYOTQ9UBF9 498 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 PILRAQ9UKJ1 303 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 KLF13Q9Y2Y9 288 aaPredicted RBP12.46□□□□□ -0.41
DDX54-202ENST00000314045 SESN1Q9Y6P5 492 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 C5orf51A6NDU8 294 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 HRKO00198 91 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 CDK4P11802 303 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 NPR2P20594 1047 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 DIO1P49895 249 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 CD83Q01151 205 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 FOXF1Q12946 379 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 ATAD3CQ5T2N8 411 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 FAM57BQ71RH2 274 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 TPRA1Q86W33 373 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 TM4SF19Q96DZ7 209 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 BORCS8Q96FH0 119 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 RHNO1Q9BSD3 238 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 CDCA4Q9BXL8 241 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 POTEKPQ9BYX7 375 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 IL20Q9NYY1 176 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 CCDC59Q9P031 241 aaKnown RBP12.46□□□□□ -0.41
DDX54-202ENST00000314045 B3GALT5Q9Y2C3 310 aa12.46□□□□□ -0.41
DDX54-202ENST00000314045 DNAJB6O75190 326 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 NAGAP17050 411 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 HTR5AP47898 357 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 SNU13P55769 128 aaKnown RBP12.46□□□□□ -0.42
DDX54-202ENST00000314045 SUMO3P55854 103 aaPredicted RBP12.46□□□□□ -0.42
DDX54-202ENST00000314045 RSU1Q15404 277 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 NTRK2Q16620 822 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 AGAP7PQ5VUJ5 663 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 LAIR1Q6GTX8 287 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 TMEM53Q6P2H8 277 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 ZADH2Q8N4Q0 377 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 OR10G3Q8NGC4 313 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 C3orf49Q96BT1 292 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 VSTM2LQ96N03 204 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 AGAP4Q96P64 663 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 DNAJB12Q9NXW2 375 aaKnown RBP12.46□□□□□ -0.42
DDX54-202ENST00000314045 KLHL9Q9P2J3 617 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 B3GALT1Q9Y5Z6 326 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 ZNF646O15015 1829 aaPredicted RBP12.46□□□□□ -0.42
DDX54-202ENST00000314045 SRCAPQ6ZRS2 3230 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 TMEM212A6NML5 194 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 RFC3P40938 356 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 HES3Q5TGS1 186 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 UBE2UQ5VVX9 321 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 PLPP5Q8NEB5 264 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 LRRC46Q96FV0 321 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 MRI1Q9BV20 369 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 OR51B6Q9H340 312 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 MED29Q9NX70 200 aa12.46□□□□□ -0.42
DDX54-202ENST00000314045 hCG_1807616A0A1W2PRN6 198 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 SURF4O15260 269 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 RRP8O43159 456 aaKnown RBP12.45□□□□□ -0.42
DDX54-202ENST00000314045 C1QCP02747 245 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 PRSS3P35030 304 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 THBS2P35442 1172 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 P2RY14Q15391 338 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 LIPNQ5VXI9 398 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 SLC25A25Q6KCM7 469 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 CBLN3Q6UW01 205 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 ZNF813Q6ZN06 617 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 TMPRSS11FQ6ZWK6 438 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 CPT1CQ8TCG5 803 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 SLC52A3Q9NQ40 469 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 ZNF69Q9UC07 566 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 EMC9Q9Y3B6 208 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 ALG1L2C9J202 215 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 RAD51DO75771 328 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 PTPN6P29350 595 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 ZNF117Q03924 483 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 GPR50Q13585 617 aa12.45□□□□□ -0.42
DDX54-202ENST00000314045 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.45□□□□□ -0.42
DDX54-202ENST00000314045 EMC4Q5J8M3 183 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms