RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CDK5R1Q15078 307 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 TRIP6Q15654 476 aaKnown RBP8.25□□□□□ -1.09
PDPN-201ENST00000294489 TPRA1Q86W33 373 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 RFLNBQ8N5W9 214 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 ESX1Q8N693 406 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 ZNF248Q8NDW4 579 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 ACOT12Q8WYK0 555 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 SMIM19Q96E16 107 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 PGLYRP3Q96LB9 341 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 TSSK2Q96PF2 358 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 METTL7AQ9H8H3 244 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 MED11Q9P086 117 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 ST6GALNAC2Q9UJ37 374 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 ADAM30Q9UKF2 790 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 FARSAQ9Y285 508 aaKnown RBP8.25□□□□□ -1.09
PDPN-201ENST00000294489 GRIP1Q9Y3R0 1128 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 HRH3Q9Y5N1 445 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 TRBV2A0A0J9YWF9 115 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 CELA2AP08217 269 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 TACSTD2P09758 323 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 JMJD7P0C870 316 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 CASP3P42574 277 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 GDI2P50395 445 aaKnown RBP8.25□□□□□ -1.09
PDPN-201ENST00000294489 MAP2K6P52564 334 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 CLDN6P56747 220 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 ACSM3Q53FZ2 586 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 HES3Q5TGS1 186 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 FAM220AQ7Z4H9 259 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 KCTD20Q7Z5Y7 419 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 EXD3Q8N9H8 876 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 ZNF511Q8NB15 262 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 OR11A1Q9GZK7 315 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 MIXL1Q9H2W2 232 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 COPS3Q9UNS2 423 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 WIF1Q9Y5W5 379 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 WDR87Q6ZQQ6 2873 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 A0A1W2PRG6 482 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 SHISA3A0PJX4 238 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 ANKRD33BA6NCL7 494 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 H7C1C5 153 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 NCR1O76036 304 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 DXOO77932 396 aaKnown RBP8.25□□□□□ -1.09
PDPN-201ENST00000294489 CD1AP06126 327 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 ICAM2P13598 275 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 EDNRAP25101 427 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 ZNF41P51814 821 aaPredicted RBP8.25□□□□□ -1.09
PDPN-201ENST00000294489 RPL27P61353 136 aaKnown RBP8.25□□□□□ -1.09
PDPN-201ENST00000294489 LCN6P62502 163 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 Q0VFX4 171 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 CDC20Q12834 499 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 SLC6A19Q695T7 634 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 XKRXQ6PP77 449 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 OR10G3Q8NGC4 313 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 HAVCR2Q8TDQ0 301 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 ADAD1Q96M93 576 aaKnown RBP8.25□□□□□ -1.09
PDPN-201ENST00000294489 MNTQ99583 582 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 SDHCQ99643 169 aaPredicted RBP8.25□□□□□ -1.09
PDPN-201ENST00000294489 ATF6BQ99941 703 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 SYT4Q9H2B2 425 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 MARCH7Q9H992 704 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 C14orf119Q9NWQ9 140 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 MRPL39Q9NYK5 338 aaKnown RBP8.25□□□□□ -1.09
PDPN-201ENST00000294489 VDAC3Q9Y277 283 aa8.25□□□□□ -1.09
PDPN-201ENST00000294489 PTPRBP23467 1997 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 NSG1A0A0A6YYJ2 146 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 MAGEB4O15481 346 aaPredicted RBP8.24□□□□□ -1.09
PDPN-201ENST00000294489 ZNF208O43345 1280 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 TMCC2O75069 709 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 ITGA10O75578 1167 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 SC5DO75845 299 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 ARL6IP5O75915 188 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 IGHMP01871 453 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 TCN2P20062 427 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 SHC1P29353 583 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 ACKR1Q16570 336 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 EEF1A1P5Q5VTE0 462 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 LYPD4Q6UWN0 246 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 OR6V1Q8N148 313 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 GDPD1Q8N9F7 314 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 TEX19Q8NA77 164 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 NLGN4YQ8NFZ3 816 aaPredicted RBP8.24□□□□□ -1.09
PDPN-201ENST00000294489 ZNF417Q8TAU3 575 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 KIAA1143Q96AT1 154 aaPredicted RBP8.24□□□□□ -1.09
PDPN-201ENST00000294489 DDIT4LQ96D03 193 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 SNX18Q96RF0 628 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 ZNF587Q96SQ5 575 aaPredicted RBP8.24□□□□□ -1.09
PDPN-201ENST00000294489 ANGPTL4Q9BY76 406 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 SRRQ9GZT4 340 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 TXNIPQ9H3M7 391 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 PROK2Q9HC23 129 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 ACOXLQ9NUZ1 547 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 TMEM14AQ9Y6G1 99 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.24□□□□□ -1.09
PDPN-201ENST00000294489 FTCDNL1E5RQL4 147 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 PLPP3O14495 311 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 DVL2O14641 736 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 TP53I11O14683 189 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 GPRIN2O60269 458 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 GATBO75879 557 aaKnown RBP8.24□□□□□ -1.09
PDPN-201ENST00000294489 PLGP00747 810 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms