RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 KDM8Q8N371 416 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 OR4D10Q8NGI6 311 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 FGF13Q92913 245 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 CDH20Q9HBT6 801 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 CCL26Q9Y258 94 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 FXYD1O00168 92 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 RD3LP0DJH9 198 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 ZNF28P17035 718 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 RPS15P62841 145 aaKnown RBP15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 AKR1C1Q04828 323 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 NIPAL3Q6P499 406 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC41A2Q96JW4 573 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 ULBP3Q9BZM4 244 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 FBXL4Q9UKA2 621 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 C4AP0C0L4 1744 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 C4BP0C0L5 1744 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 SYT5O00445 386 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 ACTL6BO94805 426 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 IGHG1P01857 330 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 MMP2P08253 660 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 ZNF44P15621 663 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 MEOX2P50222 304 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 CNN3Q15417 329 aaKnown RBP15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 HEPHL1Q6MZM0 1159 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 TMEM59Q9BXS4 323 aa15.21■□□□□ 0.03
SH3RF1-201ENST00000284637 IGLV3-10A0A075B6K4 115 aa15.21■□□□□ 0.02
SH3RF1-201ENST00000284637 CA3P07451 260 aa15.21■□□□□ 0.02
SH3RF1-201ENST00000284637 SLC19A1P41440 591 aa15.21■□□□□ 0.02
SH3RF1-201ENST00000284637 CDONQ4KMG0 1287 aa15.21■□□□□ 0.02
SH3RF1-201ENST00000284637 PLCXD3Q63HM9 321 aa15.21■□□□□ 0.02
SH3RF1-201ENST00000284637 LIX1LQ8IVB5 337 aa15.21■□□□□ 0.02
SH3RF1-201ENST00000284637 PIGCQ92535 297 aa15.21■□□□□ 0.02
SH3RF1-201ENST00000284637 RAB39BQ96DA2 213 aa15.21■□□□□ 0.02
SH3RF1-201ENST00000284637 VN1R3Q9BXE9 311 aa15.21■□□□□ 0.02
SH3RF1-201ENST00000284637 SLC25A31Q9H0C2 315 aa15.21■□□□□ 0.02
SH3RF1-201ENST00000284637 P2RY12Q9H244 342 aa15.21■□□□□ 0.02
SH3RF1-201ENST00000284637 TMEM129A0AVI4 362 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 CYTIPO60759 359 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 ELK1P19419 428 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 CAMK2DQ13557 499 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 MPEG1Q2M385 716 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 TMEM64Q6YI46 380 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 SLC16A12Q6ZSM3 486 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 NKAIN4Q8IVV8 208 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 WFDC5Q8TCV5 224 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 UCN3Q969E3 161 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 ARRDC3Q96B67 414 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 ZNF775Q96BV0 537 aaPredicted RBP15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 ST6GAL2Q96JF0 529 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 SERTAD4Q9NUC0 356 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 ASIC5Q9NY37 505 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 PCYT1BQ9Y5K3 369 aaPredicted RBP15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 CACNA1CQ13936 2221 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 TMEM202A6NGA9 273 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 SLCO2B1O94956 709 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 PAPLNO95428 1278 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 MBP02144 154 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 EPHA5P54756 1037 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 ZNF705AQ6ZN79 300 aaPredicted RBP15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 CSF3RQ99062 836 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 ELF4Q99607 663 aaPredicted RBP15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 ASH2LQ9UBL3 628 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 MOKQ9UQ07 419 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 MED16Q9Y2X0 877 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 SERINC4A6NH21 518 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 PMS2P2O95744 297 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 ANXA7P20073 488 aaKnown RBP15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 TAS2R46P59540 309 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 RAB31Q13636 194 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 TMEM41BQ5BJD5 291 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 Q6ZTK2 550 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 PAPOLGQ9BWT3 736 aaKnown RBP15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 GABARAPL3Q9BY60 117 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 OR7C1O76099 320 aaPredicted RBP15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 SRMP19623 302 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 SSTP61278 116 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 UBE2IP63279 158 aaKnown RBP15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 REEP5Q00765 189 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 KIAA0895LQ68EN5 471 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 PLPP7Q8NBV4 271 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 C8orf33Q9H7E9 229 aaPredicted RBP15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 EMC9Q9Y3B6 208 aa15.2■□□□□ 0.02
SH3RF1-201ENST00000284637 PHLPP1O60346 1717 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 PLPP1O14494 284 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 OR2F2O95006 317 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 MSR1P21757 451 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 HTD2P86397 168 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 ACSM1Q08AH1 577 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 OR2F1Q13607 317 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 LPCAT3Q6P1A2 487 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 LRRC18Q8N456 261 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 FAM213BQ8TBF2 198 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 FAM3CQ92520 227 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 WDR76Q9H967 626 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 TM7SF3Q9NS93 570 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 ZC3H12DA2A288 527 aaKnown RBP15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 AIPO00170 330 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 TXNDC12O95881 172 aa15.19■□□□□ 0.02
SH3RF1-201ENST00000284637 MEP1BQ16820 701 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms