RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CNKSR3Q6P9H4 555 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 BHLHE23Q8NDY6 225 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 CCDC74BQ96LY2 380 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 CCL26Q9Y258 94 aa6.96□□□□□ -1.3
RIF1-201ENST00000243326 LGI1O95970 557 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 CD80P33681 288 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 ISL1P61371 349 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 PMPCAQ10713 525 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 FXNQ16595 210 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 IAH1Q2TAA2 248 aaPredicted RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 ARSJQ5FYB0 599 aaPredicted RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 ZNF230Q9UIE0 474 aaPredicted RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 C3orf38Q5JPI3 329 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 CRYGNQ8WXF5 182 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 PNPLA2Q96AD5 504 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 EMC6Q9BV81 110 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 SLC17A9Q9BYT1 436 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 UFSP2Q9NUQ7 469 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 TAS2R5Q9NYW4 299 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 CPNE7Q9UBL6 633 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 ECM29Q5VYK3 1845 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 AP1G1O43747 822 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 DUSP7Q16829 419 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 SLC39A13Q96H72 371 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 DPM1O60762 260 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 MMP11P24347 488 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 NRIP3Q9NQ35 241 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 ADH1BP00325 375 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 APOA2P02652 100 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 ALOX5APP20292 161 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 RPL23AP62750 156 aaKnown RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 ZNF808Q8N4W9 903 aaPredicted RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 MARC2Q969Z3 335 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 CSF3RQ99062 836 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 SLC23A2Q9UGH3 650 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 LRRC37A3O60309 1634 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 ZNF195O14628 629 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 FABP6P51161 128 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 TAS2R20P59543 309 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 RPS15AP62244 130 aaKnown RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 BAXQ07812 192 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 TIPARPQ7Z3E1 657 aaKnown RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 TAAR2Q9P1P5 351 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 SCML1Q9UN30 329 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 GAPDHSO14556 408 aaPredicted RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 EFSO43281 561 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 CBX7O95931 251 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 ADRB1P08588 477 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 RAC2P15153 192 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 NTF3P20783 257 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 DEFB103AP81534 67 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 CDK3Q00526 305 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 VHLLQ6RSH7 139 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 CPNE4Q96A23 557 aaPredicted RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 NRTNQ99748 197 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 GLIPR2Q9H4G4 154 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 SIRT5Q9NXA8 310 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 TMEM14AQ9Y6G1 99 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 PEX12O00623 359 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 UBAC2Q8NBM4 344 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 ABI3Q9P2A4 366 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 MRPS28Q9Y2Q9 187 aaKnown RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 SBK3P0C264 359 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 UBL4AP11441 157 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 GABRB1P18505 474 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 RAP2BP61225 183 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 DSC1Q08554 894 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 PLK5Q496M5 336 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 Q6ZTK2 550 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 SCARB1Q8WTV0 552 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 SNX18Q96RF0 628 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 ANKRD10Q9NXR5 420 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 CNOT2Q9NZN8 540 aaKnown RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 A0A087WZY1 265 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 ZBTB42B2RXF5 422 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 MSR1P21757 451 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 POU3F1Q03052 451 aaPredicted RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 IRF4Q15306 451 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 RBMS2Q15434 407 aaKnown RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 ZNF813Q6ZN06 617 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 TMPRSS7Q7RTY8 843 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 ZNF417Q8TAU3 575 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 RBMXL1Q96E39 390 aaKnown RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 SCN11AQ9UI33 1791 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 SHROOM3Q8TF72 1996 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 A0A1W2PR80 420 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 PHF1O43189 567 aaPredicted RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 JUNBP17275 347 aaPredicted RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 SCGB2A2Q13296 93 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 RLN3Q8WXF3 142 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 LINC00052Q96N35 136 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 WDR76Q9H967 626 aa6.95□□□□□ -1.3
RIF1-201ENST00000243326 DDX60Q8IY21 1712 aaKnown RBP6.95□□□□□ -1.3
RIF1-201ENST00000243326 ITGB7P26010 798 aa6.94□□□□□ -1.3
RIF1-201ENST00000243326 CMSS1Q9BQ75 279 aaKnown RBP6.94□□□□□ -1.3
RIF1-201ENST00000243326 VN1R3Q9BXE9 311 aa6.94□□□□□ -1.3
RIF1-201ENST00000243326 PTGES2Q9H7Z7 377 aa6.94□□□□□ -1.3
RIF1-201ENST00000243326 PLXNB1O43157 2135 aa6.94□□□□□ -1.3
RIF1-201ENST00000243326 AIPO00170 330 aa6.94□□□□□ -1.3
RIF1-201ENST00000243326 SUSD5O60279 629 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms