RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 NKX2-4Q9H2Z4 354 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 NPDC1Q9NQX5 325 aaPredicted RBP14.8□□□□□ -0.04
LTBR-201ENST00000228918 PRODH2Q9UF12 536 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 ETV7Q9Y603 341 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 RPS10-NUDT3A0A1W2PQS6 291 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 B4DGG1 531 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 TSPAN9O75954 239 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 TPPPO94811 219 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 IFNA16P05015 189 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 PTHLHP12272 177 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 LCN1P31025 176 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 SOX2P48431 317 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 ART1P52961 327 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 BLVRAP53004 296 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 LTBQ06643 244 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 EXOSC2Q13868 293 aaKnown RBP14.8□□□□□ -0.04
LTBR-201ENST00000228918 CBLN3Q6UW01 205 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 LRRTM1Q86UE6 522 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 DND1Q8IYX4 353 aaKnown RBP14.8□□□□□ -0.04
LTBR-201ENST00000228918 OR6V1Q8N148 313 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 OR2T4Q8NH00 348 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 HMGB4Q8WW32 186 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 NSMAFQ92636 917 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 MRPL38Q96DV4 380 aaKnown RBP14.8□□□□□ -0.04
LTBR-201ENST00000228918 CLEC4MQ9H2X3 399 aaPredicted RBP14.8□□□□□ -0.04
LTBR-201ENST00000228918 TAS2R10Q9NYW0 307 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 FBXL3Q9UKT7 428 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 KNL1Q8NG31 2342 aa14.8□□□□□ -0.04
LTBR-201ENST00000228918 A0A0C4DFX4 3053 aa14.79□□□□□ -0.04
LTBR-201ENST00000228918 ACOT7O00154 380 aa14.79□□□□□ -0.04
LTBR-201ENST00000228918 F13BP05160 661 aa14.79□□□□□ -0.04
LTBR-201ENST00000228918 THEGLP0DJG4 465 aa14.79□□□□□ -0.04
LTBR-201ENST00000228918 HSD17B7P56937 341 aa14.79□□□□□ -0.04
LTBR-201ENST00000228918 TAS2R20P59543 309 aa14.79□□□□□ -0.04
LTBR-201ENST00000228918 METTL27Q8N6F8 245 aaPredicted RBP14.79□□□□□ -0.04
LTBR-201ENST00000228918 PHOSPHO1Q8TCT1 267 aa14.79□□□□□ -0.04
LTBR-201ENST00000228918 LPAR4Q99677 370 aa14.79□□□□□ -0.04
LTBR-201ENST00000228918 FKRPQ9H9S5 495 aa14.79□□□□□ -0.04
LTBR-201ENST00000228918 EXOSC3Q9NQT5 275 aaKnown RBP14.79□□□□□ -0.04
LTBR-201ENST00000228918 UBQLN4Q9NRR5 601 aa14.79□□□□□ -0.04
LTBR-201ENST00000228918 GPR27Q9NS67 375 aa14.79□□□□□ -0.04
LTBR-201ENST00000228918 H7C1C5 153 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 TOXO94900 526 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 IFNA7P01567 189 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 ZNF250P15622 560 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 DCTDP32321 178 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 RAD52P43351 418 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 LCN6P62502 163 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 RPL18Q07020 188 aaKnown RBP14.78□□□□□ -0.04
LTBR-201ENST00000228918 DLX2Q07687 328 aaPredicted RBP14.78□□□□□ -0.04
LTBR-201ENST00000228918 PUDPQ08623 228 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 LINC00303Q3SY05 128 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 MESTQ5EB52 335 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 COL13A1Q5TAT6 717 aaPredicted RBP14.78□□□□□ -0.04
LTBR-201ENST00000228918 SLC25A25Q6KCM7 469 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 FAAP20Q6NZ36 180 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 TMEM65Q6PI78 240 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 GLDNQ6ZMI3 551 aaPredicted RBP14.78□□□□□ -0.04
LTBR-201ENST00000228918 FTMTQ8N4E7 242 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 DNAAF1Q8NEP3 725 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 CCDC74AQ96AQ1 378 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 ZNF524Q96C55 264 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 MMABQ96EY8 250 aaPredicted RBP14.78□□□□□ -0.04
LTBR-201ENST00000228918 TSPAN32Q96QS1 320 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 MAP3K3Q99759 626 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 SEC22CQ9BRL7 303 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 UTP23Q9BRU9 249 aaKnown RBP14.78□□□□□ -0.04
LTBR-201ENST00000228918 NOX3Q9HBY0 568 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 SRA1Q9HD15 236 aaKnown RBP14.78□□□□□ -0.04
LTBR-201ENST00000228918 TMEM184BQ9Y519 407 aaPredicted RBP14.78□□□□□ -0.04
LTBR-201ENST00000228918 TVP23AA6NH52 213 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 LDOC1O95751 146 aaPredicted RBP14.78□□□□□ -0.04
LTBR-201ENST00000228918 HPGDP15428 266 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 MAZP56270 477 aaKnown RBP14.78□□□□□ -0.04
LTBR-201ENST00000228918 POU4F3Q15319 338 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 SHHQ15465 462 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 EMC4Q5J8M3 183 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 CLLU1Q5K131 121 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 FAM122CQ6P4D5 195 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 LRRN1Q6UXK5 716 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.78□□□□□ -0.04
LTBR-201ENST00000228918 LHFPL5Q8TAF8 219 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 OIT3Q8WWZ8 545 aa14.78□□□□□ -0.04
LTBR-201ENST00000228918 A0A1B0GTH9 108 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 OR4C45A6NMZ5 311 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 I3L521 148 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 ZNF264O43296 627 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 ZNF254O75437 659 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 IL33O95760 270 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 CPN1P15169 458 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 ENPP1P22413 925 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 GALNSP34059 522 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 GRM7Q14831 915 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 KIAA0895LQ68EN5 471 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 DNM1P46Q6ZS02 220 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 PARGQ86W56 976 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 TMPRSS12Q86WS5 348 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 SPICQ8N5J4 248 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 C15orf40Q8WUR7 153 aa14.77□□□□□ -0.04
LTBR-201ENST00000228918 KTI12Q96EK9 354 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms