RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 RPRD1BQ9NQG5 326 aaKnown RBP17.7■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ABCB10Q9NRK6 738 aa17.7■□□□□ 0.42
TNFRSF1A-201ENST00000162749 LRFN1Q9P244 771 aa17.7■□□□□ 0.42
TNFRSF1A-201ENST00000162749 STUB1Q9UNE7 303 aa17.7■□□□□ 0.42
TNFRSF1A-201ENST00000162749 PEX16Q9Y5Y5 336 aa17.7■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SPIN1Q9Y657 262 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ZIC3O60481 467 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 CBR3O75828 277 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 OPN1LWP04000 364 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 PSMA1P25786 263 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 GTF2E2P29084 291 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 S100A5P33763 92 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SOX6P35712 828 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ZNF45Q02386 682 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 PUDPQ08623 228 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ACKR1Q16570 336 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SLC22A16Q86VW1 577 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 KDM8Q8N371 416 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 GATAD2BQ8WXI9 593 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 TSSK2Q96PF2 358 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 BARHL1Q9BZE3 327 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 DEPPQ9NTK1 212 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 DNAJC13O75165 2243 aa17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 URB1O60287 2271 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1A-201ENST00000162749 H7C1C5 153 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 CTDSP2O14595 271 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 TBX1O43435 398 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 FZD7O75084 574 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 NEURL1O76050 574 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SHC1P29353 583 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 CD96P40200 585 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 LCN6P62502 163 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SPINK14Q6IE38 97 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ARIH2OSQ8N7S6 290 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 FAM83FQ8NEG4 500 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SLC25A43Q8WUT9 341 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 TBX5Q99593 518 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 KCNS3Q9BQ31 491 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ARHGAP9Q9BRR9 750 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ALKBH4Q9NXW9 302 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 CEP295Q9C0D2 2601 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 MS4A18H0YCH9 400 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 CPEP16870 476 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 GPR85P60893 370 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 LGALS3BPQ08380 585 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 POU4F2Q12837 409 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SRSF6Q13247 344 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 GGTLC2Q14390 218 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 PON3Q15166 354 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 MS4A18Q3C1V0 323 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 STEAP3Q658P3 488 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 H1FNTQ75WM6 255 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 EXD3Q8N9H8 876 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 OR10H4Q8NGA5 316 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 NUAK2Q9H093 628 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 TXNIPQ9H3M7 391 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 DKKL1Q9UK85 242 aa17.68■□□□□ 0.42
TNFRSF1A-201ENST00000162749 A0A1W2PNR3 127 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 DCTN6O00399 190 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SLC30A4O14863 429 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 HLA-DOBP13765 273 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SFTPDP35247 375 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ETV6P41212 452 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SLC25A1P53007 311 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 RPL27P61353 136 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 TLE3Q04726 772 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 CAMK2BQ13554 666 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SLC35D3Q5M8T2 416 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 LINC01590Q5TEZ4 76 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 RAET1LQ5VY80 246 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 CCDC190Q86UF4 302 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SMAP2Q8WU79 429 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SMPDL3BQ92485 455 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 OR5B2Q96R09 309 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 TIMP4Q99727 224 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 CHST11Q9NPF2 352 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 UGT2A1Q9Y4X1 527 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ZNF407Q9C0G0 2248 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 A0A075B6Q4 140 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 OR2M5A3KFT3 312 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 LRRC3CA6NJW4 275 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ZNF670-ZNF695F2Z2N8 137 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ARHGEF9O43307 516 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 AKR7A3O95154 331 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 IGHMP01871 453 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 DIO1P49895 249 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ZP4Q12836 540 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ZNF181Q2M3W8 571 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 KLHL36Q8N4N3 616 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 OR6K6Q8NGW6 343 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 OR52N1Q8NH53 320 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ZNF519Q8TB69 540 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SIGLEC12Q96PQ1 595 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 SYT4Q9H2B2 425 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 B3GALT5Q9Y2C3 310 aa17.67■□□□□ 0.42
TNFRSF1A-201ENST00000162749 ATP6V1G1O75348 118 aa17.66■□□□□ 0.42
TNFRSF1A-201ENST00000162749 LALBAP00709 142 aa17.66■□□□□ 0.42
TNFRSF1A-201ENST00000162749 TFP02787 698 aa17.66■□□□□ 0.42
TNFRSF1A-201ENST00000162749 FKBP2P26885 142 aaKnown RBP17.66■□□□□ 0.42
TNFRSF1A-201ENST00000162749 TMEM176BQ3YBM2 270 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms