RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	RHBDD3	Q9Y3P4	386 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	PCDHGA1	Q9Y5H4	931 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	KCNE3	Q9Y6H6	103 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	OR2J2	O76002	312 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	KCNK2	O95069	426 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	APOC1	P02654	83 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	SFTPB	P07988	381 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	AMY2B	P19961	511 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	FOXK2	Q01167	660 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	FAM189A2	Q15884	450 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	RAB11B	Q15907	218 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	COL28A1	Q2UY09	1125 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	A4GALT	Q9NPC4	353 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	P4HTM	Q9NXG6	502 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	LRFN1	Q9P244	771 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	GAPDHS	O14556	408 aa	Predicted RBP	13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	SEC14L2	O76054	403 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	HTR3A	P46098	478 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	PTH2R	P49190	550 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ZNF45	Q02386	682 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	LRRN1	Q6UXK5	716 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	SLC16A14	Q7RTX9	510 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	BTLA	Q7Z6A9	289 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	OR4D9	Q8NGE8	314 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ZNF566	Q969W8	418 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	OR2A14	Q96R47	310 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	C1QTNF6	Q9BXI9	259 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	C12orf49	Q9H741	205 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	PCDHB16	Q9NRJ7	776 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ZC3H12D	A2A288	527 aa	Known RBP	13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	P2RX6	O15547	441 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	EML2	O95834	649 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ZGLP1	P0C6A0	271 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	GNRHR	P30968	328 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	POLR2H	P52434	150 aa	Known RBP	13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	TCTN3	Q6NUS6	607 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	IL17RD	Q8NFM7	739 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	GPBAR1	Q8TDU6	330 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	SLC5A7	Q9GZV3	580 aa		13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.14	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	PRAMEF25	A6NGN4	478 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	MTRF1	O75570	445 aa	Known RBP	13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	MSL3P1	P0C860	447 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	EDN3	P14138	238 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	MAP2K3	P46734	347 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	GPR139	Q6DWJ6	353 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	SPRED1	Q7Z699	444 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	DNAJC22	Q8N4W6	341 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	C15orf40	Q8WUR7	153 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	TOMM40L	Q969M1	308 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	SEMA4C	Q9C0C4	833 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ATPIF1	Q9UII2	106 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	NUP50	Q9UKX7	468 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	NEU3	Q9UQ49	428 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	C14orf166	Q9Y224	244 aa	Known RBP	13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	RASD1	Q9Y272	281 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	CKAP5	Q14008	2032 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997		L7N2F9	121 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	EPHA2	P29317	976 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	THBS2	P35442	1172 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	VAMP2	P63027	116 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	SELENBP1	Q13228	472 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	RNASE10	Q5GAN6	216 aa	Known RBP	13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	LANCL3	Q6ZV70	420 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	FAM57B	Q71RH2	274 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	PIGC	Q92535	297 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	TSSK2	Q96PF2	358 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	DEFB127	Q9H1M4	99 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	CLEC2D	Q9UHP7	191 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ENPP5	Q9UJA9	477 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	IGHV3-64D	A0A0J9YX35	117 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	MAGEB4	O15481	346 aa	Predicted RBP	13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	NUPL2	O15504	423 aa	Known RBP	13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	NCR1	O76036	304 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	FOLR1	P15328	257 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	CD82	P27701	267 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	GRK5	P34947	590 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	CARD18	P57730	90 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	PUDP	Q08623	228 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	TRAM1	Q15629	374 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	NTRK2	Q16620	822 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	PLCZ1	Q86YW0	608 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	SMAP2	Q8WU79	429 aa	Predicted RBP	13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	DEDD2	Q8WXF8	326 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	MED30	Q96HR3	178 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ACER3	Q9NUN7	267 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997	NUDT15	Q9NV35	164 aa		13.13	□□□□□ -0.31
NEDD4L-238	ENST00000635997		M0R082	166 aa		13.12	□□□□□ -0.31
NEDD4L-238	ENST00000635997	SYT5	O00445	386 aa		13.12	□□□□□ -0.31
NEDD4L-238	ENST00000635997	PRKY	O43930	277 aa		13.12	□□□□□ -0.31
NEDD4L-238	ENST00000635997	LGI1	O95970	557 aa		13.12	□□□□□ -0.31
NEDD4L-238	ENST00000635997	IL2RA	P01589	272 aa		13.12	□□□□□ -0.31
NEDD4L-238	ENST00000635997	APLNR	P35414	380 aa		13.12	□□□□□ -0.31
NEDD4L-238	ENST00000635997	AGAP6	Q5VW22	663 aa		13.12	□□□□□ -0.31
NEDD4L-238	ENST00000635997	CELF2-AS1	Q8N7Q2	184 aa		13.12	□□□□□ -0.31
NEDD4L-238	ENST00000635997	OR13F1	Q8NGS4	319 aa		13.12	□□□□□ -0.31
NEDD4L-238	ENST00000635997	OR13C9	Q8NGT0	318 aa		13.12	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ZNF417	Q8TAU3	575 aa		13.12	□□□□□ -0.31
NEDD4L-238	ENST00000635997	ZG16B	Q96DA0	208 aa		13.12	□□□□□ -0.31

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