RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 KANTRA0A1W2PQU2 76 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 EIF4E2O60573 245 aaKnown RBP13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 OR2F2O95006 317 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 CBX7O95931 251 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 GUSBP08236 651 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 H2AFB1P0C5Y9 115 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 MST1P26927 711 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 MAOBP27338 520 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 HOXA1P49639 335 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 OR2F1Q13607 317 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 MELKQ14680 651 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 KCNRGQ8N5I3 272 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 C12orf45Q8N5I9 185 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 RELL2Q8NC24 303 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 RNF166Q96A37 237 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 CCDC74AQ96AQ1 378 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 PBX4Q9BYU1 374 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 LMAN2LQ9H0V9 348 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 PIGMQ9H3S5 423 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 SAV1Q9H4B6 383 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 BARX1Q9HBU1 254 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 DNAJB12Q9NXW2 375 aaKnown RBP13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 GPN3Q9UHW5 284 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 MOKQ9UQ07 419 aa13.52□□□□□ -0.25
CACNA1A-220ENST00000635988 PRR19A6NJB7 356 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 FAM74A7A6NL05 159 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 CD8AP01732 235 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 CFPP27918 469 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 PRSS3P35030 304 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 ACTBP60709 375 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 PRPS1P60891 318 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 UBE2MP61081 183 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 ACTG1P63261 375 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 FAM74A3Q4VXF1 159 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 LPCAT3Q6P1A2 487 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 MAMSTRQ6ZN01 415 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 ALG12Q9BV10 488 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 LYRM4Q9HD34 91 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 MYOZ1Q9NP98 299 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 ZNF337Q9Y3M9 751 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 ARPC4-TTLL3A0A0A6YYG9 625 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 PSMD9O00233 223 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 UPK3AO75631 287 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 RPP14O95059 124 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 NKX2-2O95096 273 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 ITGB2P05107 769 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 RORAP35398 523 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 SOX2P48431 317 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 LINC01590Q5TEZ4 76 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 LIPNQ5VXI9 398 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 ZNF595Q8IYB9 648 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 BEST3Q8N1M1 668 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 BPIFCQ8NFQ6 507 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 ZCCHC10Q8TBK6 192 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 TM4SF19Q96DZ7 209 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 SLC25A21Q9BQT8 299 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 POTEKPQ9BYX7 375 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 COMMD4Q9H0A8 199 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 SLC17A5Q9NRA2 495 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 GMEB2Q9UKD1 530 aa13.51□□□□□ -0.25
CACNA1A-220ENST00000635988 TRBV5-7A0A0A0MS05 114 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 TRAV14DV4A0A0A6YYC5 116 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 A0A1B0GVT2 93 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 SRPX2O60687 465 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 LDB3O75112 727 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 CTAG2O75638 210 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 OR8G3PP0DMU2 310 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 HOXB1P14653 301 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 CSRP1P21291 193 aaKnown RBP13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 SLC25A1P53007 311 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 ID2Q02363 134 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 STEAP1BQ6NZ63 245 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 ABHD13Q7L211 337 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 OR4D10Q8NGI6 311 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 CD99L2Q8TCZ2 262 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 DUSP19Q8WTR2 217 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 LCN9Q8WX39 176 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 SLC22A18Q96BI1 424 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 ADAD1Q96M93 576 aaKnown RBP13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 FRRS1LQ9P0K9 344 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 YBX2Q9Y2T7 364 aaKnown RBP13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 ZNF98A6NK75 572 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 CDC40O60508 579 aaKnown RBP eCLIP13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 ZNF254O75437 659 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 GPR75O95800 540 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 GP1BAP07359 652 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 ADH7P40394 386 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 CBX5P45973 191 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 TOMM20Q15388 145 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 PRICKLE4Q2TBC4 344 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 GPR148Q8TDV2 347 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 ARSGQ96EG1 525 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 LRRC3BQ96PB8 259 aa13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 GPX7Q96SL4 187 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-220ENST00000635988 RAB19A4D1S5 217 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 TMEM212A6NML5 194 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 PRR32B1ATL7 298 aa13.49□□□□□ -0.25
CACNA1A-220ENST00000635988 SULT1C2O00338 296 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms