RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 SPCS2Q15005 226 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 RAB11BQ15907 218 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 FAM205BPQ63HN1 556 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 OR7E24Q6IFN5 339 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 FAM26EQ8N5C1 309 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 OR2T35Q8NGX2 323 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 ZNF775Q96BV0 537 aaPredicted RBP12.72□□□□□ -0.37
CIITA-213ENST00000618327 VWCEQ96DN2 955 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 YARS2Q9Y2Z4 477 aaKnown RBP12.72□□□□□ -0.37
CIITA-213ENST00000618327 SHISA7A6NL88 538 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 TOX3O15405 576 aaPredicted RBP12.72□□□□□ -0.37
CIITA-213ENST00000618327 EIF1BO60739 113 aaKnown RBP12.72□□□□□ -0.37
CIITA-213ENST00000618327 CSO75390 466 aaKnown RBP12.72□□□□□ -0.37
CIITA-213ENST00000618327 LCATP04180 440 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 TUBG1P23258 451 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 ZXDAP98168 799 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 HES5Q5TA89 166 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 SLC35D2Q76EJ3 337 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 ZNF565Q8N9K5 539 aa12.72□□□□□ -0.37
CIITA-213ENST00000618327 SLC25A43Q8WUT9 341 aaPredicted RBP12.72□□□□□ -0.37
CIITA-213ENST00000618327 TRBV5-3A0A0A0MS03 114 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 METTL15A6NJ78 407 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 FTCDNL1E5RQL4 147 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 ZNF593O00488 134 aaPredicted RBP12.71□□□□□ -0.37
CIITA-213ENST00000618327 CAPNS1P04632 268 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 ART1P52961 327 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 BIDP55957 195 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 PLK5Q496M5 336 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 BAIAP2L2Q6UXY1 529 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 BEST3Q8N1M1 668 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 NANOS1Q8WY41 292 aaKnown RBP12.71□□□□□ -0.37
CIITA-213ENST00000618327 ZNF486Q96H40 463 aaPredicted RBP12.71□□□□□ -0.37
CIITA-213ENST00000618327 URM1Q9BTM9 101 aaKnown RBP12.71□□□□□ -0.37
CIITA-213ENST00000618327 ERVMER34-1Q9H9K5 563 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 KCNIP3Q9Y2W7 256 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 RFPL3O75679 317 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 MSL3P1P0C860 447 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 OR8G3PP0DMU2 310 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 ERGP11308 486 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 DRD5P21918 477 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 RPL35P42766 123 aaKnown RBP12.71□□□□□ -0.37
CIITA-213ENST00000618327 UBE2UQ5VVX9 321 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 RPL22L1Q6P5R6 122 aaKnown RBP12.71□□□□□ -0.37
CIITA-213ENST00000618327 LANCL3Q6ZV70 420 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 H1FNTQ75WM6 255 aaPredicted RBP12.71□□□□□ -0.37
CIITA-213ENST00000618327 DPY19L4Q7Z388 723 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 FAM71F1Q96KD3 344 aaPredicted RBP12.71□□□□□ -0.37
CIITA-213ENST00000618327 SEMA4CQ9C0C4 833 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 IFNA2P01563 188 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 SCG5P05408 212 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 SMIM18P0DKX4 95 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 CDK4P11802 303 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 EPHA2P29317 976 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 ALDH3B2P48448 385 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 SELENOVP59797 346 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 SPEM2Q0P670 501 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 GLYR1Q49A26 553 aaPredicted RBP12.71□□□□□ -0.37
CIITA-213ENST00000618327 SYT6Q5T7P8 510 aaPredicted RBP12.71□□□□□ -0.37
CIITA-213ENST00000618327 C3orf33Q6P1S2 294 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 C8orf82Q6P1X6 216 aaPredicted RBP12.71□□□□□ -0.37
CIITA-213ENST00000618327 GALNT11Q8NCW6 608 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 TRMT10AQ8TBZ6 339 aaKnown RBP12.71□□□□□ -0.37
CIITA-213ENST00000618327 IP6K3Q96PC2 410 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 ZNF649Q9BS31 505 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 COPZ2Q9P299 210 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 WIF1Q9Y5W5 379 aa12.71□□□□□ -0.37
CIITA-213ENST00000618327 PIKFYVEQ9Y2I7 2098 aa12.71□□□□□ -0.38
CIITA-213ENST00000618327 CCDC187A0A096LP49 1063 aa12.71□□□□□ -0.38
CIITA-213ENST00000618327 A0A1B0GVG6 124 aa12.71□□□□□ -0.38
CIITA-213ENST00000618327 TMEM269A0A1B0GVZ9 245 aa12.71□□□□□ -0.38
CIITA-213ENST00000618327 CDK10Q15131 360 aa12.71□□□□□ -0.38
CIITA-213ENST00000618327 SF3B4Q15427 424 aaKnown RBP eCLIP12.71□□□□□ -0.38
CIITA-213ENST00000618327 PLEKHN1Q494U1 663 aaPredicted RBP12.71□□□□□ -0.38
CIITA-213ENST00000618327 TMEM244Q5VVB8 128 aa12.71□□□□□ -0.38
CIITA-213ENST00000618327 LACC1Q8IV20 430 aa12.71□□□□□ -0.38
CIITA-213ENST00000618327 GDPD1Q8N9F7 314 aa12.71□□□□□ -0.38
CIITA-213ENST00000618327 ZNF511Q8NB15 262 aa12.71□□□□□ -0.38
CIITA-213ENST00000618327 TAAR9Q96RI9 348 aa12.71□□□□□ -0.38
CIITA-213ENST00000618327 A4GNTQ9UNA3 340 aa12.71□□□□□ -0.38
CIITA-213ENST00000618327 KLK4Q9Y5K2 254 aa12.71□□□□□ -0.38
CIITA-213ENST00000618327 ZNF646O15015 1829 aaPredicted RBP12.7□□□□□ -0.38
CIITA-213ENST00000618327 MRPL33O75394 65 aaKnown RBP12.7□□□□□ -0.38
CIITA-213ENST00000618327 STK17BO94768 372 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 SFTPBP07988 381 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 FBXO45P0C2W1 286 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 PRKACAP17612 351 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 CASP6P55212 293 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 WDR74Q6RFH5 385 aaPredicted RBP12.7□□□□□ -0.38
CIITA-213ENST00000618327 ZNF584Q8IVC4 421 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 SLC7A5P1Q8MH63 180 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 ARHGDIGQ99819 225 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 ENKD1Q9H0I2 346 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 HHLA2Q9UM44 414 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 CAMK2AQ9UQM7 478 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 KLRC4-KLRK1H3BQV0 150 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 M0R082 166 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 HSPA12AO43301 675 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 SSX5O60225 188 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 GPRIN2O60269 458 aa12.7□□□□□ -0.38
CIITA-213ENST00000618327 CRYZL1O95825 349 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms