RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 PRDM6Q9NQX0 595 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF226Q9NYT6 803 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 B3GNT3Q9Y2A9 372 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 COA3Q9Y2R0 106 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-218ENST00000610726 YARS2Q9Y2Z4 477 aaKnown RBP6.66□□□□□ -1.34
CSDE1-218ENST00000610726 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 A0A1W2PQ09 198 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 FTCDNL1E5RQL4 147 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 LYRM1O43325 122 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 GPRIN2O60269 458 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 GABARAPO95166 117 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 C1QCP02747 245 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 RLN2P04090 185 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 YES1P07947 543 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 AMY2BP19961 511 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 RRADP55042 308 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 FOXK1P85037 733 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 ESPNLQ6ZVH7 1005 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 FCRLAQ7L513 359 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 MRPL21Q7Z2W9 205 aaKnown RBP6.66□□□□□ -1.34
CSDE1-218ENST00000610726 PARP16Q8N5Y8 322 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 ZSCAN4Q8NAM6 433 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-218ENST00000610726 OR13C9Q8NGT0 318 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 ABHD4Q8TB40 342 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 TM9SF4Q92544 642 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 GIMAP5Q96F15 307 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 SCGB3A2Q96PL1 93 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 PIGQQ9BRB3 760 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 PLA2G12AQ9BZM1 189 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 WWTR1Q9GZV5 400 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 MMP28Q9H239 520 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 CMC2Q9NRP2 79 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 MED29Q9NX70 200 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 C14orf166Q9Y224 244 aaKnown RBP6.66□□□□□ -1.34
CSDE1-218ENST00000610726 EMC9Q9Y3B6 208 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 TRPM7Q96QT4 1865 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 TBX19O60806 448 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 UPK1BO75841 260 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 NKX2-2O95096 273 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 IFNA21P01568 189 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 AMY2AP04746 511 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 GSTT2P0CG29 244 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 ARSBP15848 533 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 RAB3AP20336 220 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 MSX1P28360 303 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 PNLIPRP2P54317 469 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 GP2P55259 537 aaKnown RBP6.66□□□□□ -1.34
CSDE1-218ENST00000610726 TGFBR3Q03167 851 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 RPL18Q07020 188 aaKnown RBP6.66□□□□□ -1.34
CSDE1-218ENST00000610726 PCGF3Q3KNV8 242 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 C3orf33Q6P1S2 294 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 LAX1Q8IWV1 398 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 CCDC54Q8NEL0 328 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 OR5D14Q8NGL3 314 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 SYNPRQ8TBG9 265 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 GPR119Q8TDV5 335 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF845Q96IR2 970 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-218ENST00000610726 CDC6Q99741 560 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 WDR76Q9H967 626 aa6.66□□□□□ -1.34
CSDE1-218ENST00000610726 A0A0X1KG70 313 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 C4orf47A7E2U8 309 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF850A8MQ14 1090 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 STK17BO94768 372 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 GLCEO94923 617 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 H2AFB2P0C5Z0 115 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 TGFBR1P36897 503 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 HTR5AP47898 357 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 S100A10P60903 97 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 SWI5Q1ZZU3 235 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 PRICKLE4Q2TBC4 344 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 PRTGQ2VWP7 1150 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF628Q5EBL2 1059 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 LIPNQ5VXI9 398 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 HBMQ6B0K9 141 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 THOC7Q6I9Y2 204 aaKnown RBP6.65□□□□□ -1.34
CSDE1-218ENST00000610726 FIP1L1Q6UN15 594 aaKnown RBP6.65□□□□□ -1.34
CSDE1-218ENST00000610726 LIX1LQ8IVB5 337 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 POGLUT1Q8NBL1 392 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 OR1N1Q8NGS0 311 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 HAVCR2Q8TDQ0 301 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 HAVCR1Q96D42 359 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 NECAB3Q96P71 396 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-218ENST00000610726 LAT2Q9GZY6 243 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 NUDT15Q9NV35 164 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 LRFN1Q9P244 771 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 NOSIPQ9Y314 301 aaKnown RBP6.65□□□□□ -1.34
CSDE1-218ENST00000610726 WIF1Q9Y5W5 379 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 SCN5AQ14524 2016 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 SLC43A1O75387 559 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 MT-ATP6P00846 226 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 ABOP16442 354 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 ENPP1P22413 925 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 PEBP1P30086 187 aaKnown RBP6.65□□□□□ -1.34
CSDE1-218ENST00000610726 CASP6P55212 293 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 RPL27P61353 136 aaKnown RBP6.65□□□□□ -1.34
CSDE1-218ENST00000610726 PWWP2BQ6NUJ5 590 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 PHC2Q8IXK0 858 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 SLC22A18ASQ8N1D0 253 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 OR5D18Q8NGL1 313 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 TBC1D15Q8TC07 691 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms