RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ABHD13Q7L211 337 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 JAZF1Q86VZ6 243 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 OR4C16Q8NGL9 310 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 OR5AK2Q8NH90 309 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 GABARAPH6UMI1 98 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 OGG1O15527 345 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 M6PRP20645 277 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 CCKBRP32239 447 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 LTBQ06643 244 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 HLXQ14774 488 aaPredicted RBP18.63■□□□□ 0.57
SSBP3-216ENST00000610401 CBLN3Q6UW01 205 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 PRSS58Q8IYP2 241 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 WNT2BQ93097 391 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 FAM60AQ9NP50 221 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 KCNMB2Q9Y691 235 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 SPACA6W5XKT8 324 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 MCRIP1C9JLW8 97 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 TAGLNQ01995 201 aaKnown RBP18.63■□□□□ 0.57
SSBP3-216ENST00000610401 ENPP2Q13822 863 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 NKPD1Q17RQ9 610 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 FAM109BQ6ICB4 259 aaPredicted RBP18.63■□□□□ 0.57
SSBP3-216ENST00000610401 TMEM205Q6UW68 189 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 LRRN1Q6UXK5 716 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 GLDNQ6ZMI3 551 aaPredicted RBP18.63■□□□□ 0.57
SSBP3-216ENST00000610401 ZNF627Q7L945 461 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 CSNK1A1LQ8N752 337 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 NSMAFQ92636 917 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 SLC25A36Q96CQ1 311 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 ZFYVE21Q9BQ24 234 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 KIR3DX1Q9H7L2 352 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 FRRS1LQ9P0K9 344 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 SLC17A4Q9Y2C5 497 aa18.63■□□□□ 0.57
SSBP3-216ENST00000610401 NUDT14O95848 222 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 CD3DP04234 171 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 HPGDP15428 266 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 DMRTC1Q5HYR2 192 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 MUC20Q8N307 709 aaPredicted RBP18.62■□□□□ 0.57
SSBP3-216ENST00000610401 EXO5Q9H790 373 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 GPR160Q9UJ42 338 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 RWDD3Q9Y3V2 267 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 TEX51A0A1B0GUA7 166 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 ELOA3DA6NLF2 546 aaPredicted RBP18.62■□□□□ 0.57
SSBP3-216ENST00000610401 PDCD5O14737 125 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 APBB3O95704 486 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 HOXD4P09016 255 aaPredicted RBP18.62■□□□□ 0.57
SSBP3-216ENST00000610401 DYRK1AQ13627 763 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 CEBPEQ15744 281 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 ELOA3BQ3SY89 546 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 LSM14AQ8ND56 463 aaKnown RBP18.62■□□□□ 0.57
SSBP3-216ENST00000610401 ELOA3Q8NG57 546 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 PHOSPHO1Q8TCT1 267 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 ERVK-19Q9WJR5 959 aa18.62■□□□□ 0.57
SSBP3-216ENST00000610401 RBBP9O75884 186 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 DIO1P49895 249 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 LGALS3BPQ08380 585 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 ZNHIT3Q15649 155 aaPredicted RBP18.61■□□□□ 0.57
SSBP3-216ENST00000610401 TMUB2Q71RG4 321 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 FAM220AQ7Z4H9 259 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 AMELYQ99218 206 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 SYT4Q9H2B2 425 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 DUSP22Q9NRW4 184 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 LAMP5Q9UJQ1 280 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 SLC22A13Q9Y226 551 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 SPAG17Q6Q759 2223 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 UBE2QL1A1L167 161 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 OIP5O43482 229 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 ITGA10O75578 1167 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 RP2O75695 350 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 NMBP08949 121 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 VEGFBP49765 207 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 FHL5Q5TD97 284 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 RPL13AP3Q6NVV1 102 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 CAMKVQ8NCB2 501 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 TOR1AIP2Q8NFQ8 470 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 KLHL15Q96M94 604 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 JAM3Q9BX67 310 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 SLITRK2Q9H156 845 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 PILRAQ9UKJ1 303 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 RLN2P04090 185 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 AP3S2P59780 193 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 OVCH1Q7RTY7 1134 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 MDGA2Q7Z553 956 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 KDM8Q8N371 416 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 NRSN2Q9GZP1 204 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 ENTPD2Q9Y5L3 495 aa18.61■□□□□ 0.57
SSBP3-216ENST00000610401 RP1P56715 2156 aa18.6■□□□□ 0.57
SSBP3-216ENST00000610401 PLSCR5A0PG75 271 aa18.6■□□□□ 0.57
SSBP3-216ENST00000610401 SEC61A1P61619 476 aaKnown RBP18.6■□□□□ 0.57
SSBP3-216ENST00000610401 SMAD2Q15796 467 aaKnown RBP18.6■□□□□ 0.57
SSBP3-216ENST00000610401 ZNF454Q8N9F8 522 aa18.6■□□□□ 0.57
SSBP3-216ENST00000610401 AVL9Q8NBF6 648 aa18.6■□□□□ 0.57
SSBP3-216ENST00000610401 ARPC5LQ9BPX5 153 aa18.6■□□□□ 0.57
SSBP3-216ENST00000610401 PFDN2Q9UHV9 154 aa18.6■□□□□ 0.57
SSBP3-216ENST00000610401 CARNS1A5YM72 827 aa18.6■□□□□ 0.57
SSBP3-216ENST00000610401 URADA6NGE7 173 aa18.6■□□□□ 0.57
SSBP3-216ENST00000610401 APODP05090 189 aa18.6■□□□□ 0.57
SSBP3-216ENST00000610401 C5AR1P21730 350 aa18.6■□□□□ 0.57
SSBP3-216ENST00000610401 S100A11P31949 105 aa18.6■□□□□ 0.57
SSBP3-216ENST00000610401 OR14A16Q8NHC5 309 aa18.6■□□□□ 0.57
SSBP3-216ENST00000610401 RSPH9Q9H1X1 276 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms