RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CLOCKO15516 846 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 SLC43A1O75387 559 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 KRT33AO76009 404 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 ZNF432O94892 652 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 CCNB2O95067 398 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 ADAP00813 363 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 TSPAN19P0C672 248 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 IFNGR1P15260 489 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 PSMB1P20618 241 aaKnown RBP13.19□□□□□ -0.3
DDX39A-221ENST00000593026 CCKARP32238 428 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 FAPQ12884 760 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 ITGADQ13349 1161 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 LAPTM4AQ15012 233 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 ALG10Q5BKT4 473 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 HIST2H2BCQ6DN03 193 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 NHLRC1Q6VVB1 395 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 LINC00471Q8N535 108 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 MOSPD2Q8NHP6 518 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 SLCO4A1Q96BD0 722 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 TXNDC15Q96J42 360 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 RAB3IPQ96QF0 476 aaPredicted RBP13.19□□□□□ -0.3
DDX39A-221ENST00000593026 OR2M2Q96R28 347 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 EMC6Q9BV81 110 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 NDEL1Q9GZM8 345 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 SLC24A3Q9HC58 644 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 VNN3Q9NY84 501 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 U3KQV3 271 aa13.19□□□□□ -0.3
DDX39A-221ENST00000593026 FREM1Q5H8C1 2179 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 SLC35F4A4IF30 521 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 TUBAL3A6NHL2 446 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 ZNF726A6NNF4 738 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 MCIDASD6RGH6 385 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 COX5AP20674 150 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 IL32P24001 234 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 KIR2DL3P43628 341 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 BIDP55957 195 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 PRPS1P60891 318 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 PPP1R8Q12972 351 aaKnown RBP13.18□□□□□ -0.3
DDX39A-221ENST00000593026 GK3PQ14409 553 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 MELKQ14680 651 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 ZBED5Q49AG3 693 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 SFRP5Q5T4F7 317 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 CARD17Q5XLA6 110 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 ABHD12BQ7Z5M8 362 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-221ENST00000593026 ZER1Q7Z7L7 766 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 TMEM123Q8N131 208 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 OR9Q2Q8NGE9 314 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 KISS1RQ969F8 398 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-221ENST00000593026 ADAD1Q96M93 576 aaKnown RBP13.18□□□□□ -0.3
DDX39A-221ENST00000593026 TNFRSF13CQ96RJ3 184 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 HDHD5Q9BXW7 423 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 MCCC2Q9HCC0 563 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 NDRG3Q9UGV2 375 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 GPR52Q9Y2T5 361 aa13.18□□□□□ -0.3
DDX39A-221ENST00000593026 UNC119BA6NIH7 251 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 KLF4O43474 513 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 TIPRLO75663 272 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 LYZL6O75951 148 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 BCL10O95999 233 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 IGHV1-2P23083 117 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 FPR3P25089 353 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 DNAJA1P31689 397 aaKnown RBP13.17□□□□□ -0.3
DDX39A-221ENST00000593026 DAP3P51398 398 aaKnown RBP13.17□□□□□ -0.3
DDX39A-221ENST00000593026 ACTR3P61158 418 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 LGALS3BPQ08380 585 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 FHL1Q13642 323 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 KPNB1Q14974 876 aaKnown RBP13.17□□□□□ -0.3
DDX39A-221ENST00000593026 TAF11Q15544 211 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 TSC22D1Q15714 1073 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 ZSCAN26Q16670 478 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 MICAQ29983 383 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 ANKRD34AQ69YU3 496 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 C1orf94Q6P1W5 598 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 PGBD2Q6P3X8 592 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 IGFN1Q86VF2 1251 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 GPR137CQ8N3F9 429 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 STEAP2Q8NFT2 490 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 OR6N1Q8NGY5 312 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 OR6X1Q8NH79 312 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 GNPDA2Q8TDQ7 276 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 DUS3LQ96G46 650 aaKnown RBP13.17□□□□□ -0.3
DDX39A-221ENST00000593026 ALKBH3Q96Q83 286 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-221ENST00000593026 GPA33Q99795 319 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 LINC00470Q9BZP3 86 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 ARMC1Q9NVT9 282 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 TAS2R16Q9NYV7 291 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 DNAJB9Q9UBS3 223 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 SIGLEC7Q9Y286 467 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 AP4S1Q9Y587 144 aa13.17□□□□□ -0.3
DDX39A-221ENST00000593026 ADGRG4Q8IZF6 3080 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 CIB4A0PJX0 185 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 SH3D21A4FU49 640 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 NPIPB13A6NJU9 1138 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 NPIPB4C9JG80 1138 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 ZNF587BE7ETH6 402 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 HNRNPRO43390 633 aaKnown RBP13.16□□□□□ -0.3
DDX39A-221ENST00000593026 DEAF1O75398 565 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-221ENST00000593026 E2F6O75461 281 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 UPK3AO75631 287 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 PPP3CBP16298 524 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms