RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 POC1B-GALNT4F8VUJ3 575 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 PIP5K1CO60331 668 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 AHSA1O95433 338 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 LCKP06239 509 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 TFPTP0C1Z6 253 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 MYL2P10916 166 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 LIPAP38571 399 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 MRPS25P82663 173 aaKnown RBP9.43□□□□□ -0.9
CASC3-208ENST00000583649 RBBP4Q09028 425 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 TSTQ16762 297 aaKnown RBP9.43□□□□□ -0.9
CASC3-208ENST00000583649 BEAN1Q3B7T3 259 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 GALNTL6Q49A17 601 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 ATP6AP1LQ52LC2 224 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 RFTN2Q52LD8 501 aaPredicted RBP9.43□□□□□ -0.9
CASC3-208ENST00000583649 GPAT3Q53EU6 434 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 ESCO2Q56NI9 601 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 KLF17Q5JT82 389 aaPredicted RBP9.43□□□□□ -0.9
CASC3-208ENST00000583649 AP1ARQ63HQ0 302 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 LRRN1Q6UXK5 716 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 ZNF813Q6ZN06 617 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 ZNF620Q6ZNG0 422 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 C6orf120Q7Z4R8 191 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 EPHX4Q8IUS5 362 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 VPS37AQ8NEZ2 397 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 OR1J2Q8NGS2 313 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 ZNF519Q8TB69 540 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 XAGE5Q8WWM1 108 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 TAF15Q92804 592 aaKnown RBP eCLIP9.43□□□□□ -0.9
CASC3-208ENST00000583649 FAM71F1Q96KD3 344 aaPredicted RBP9.43□□□□□ -0.9
CASC3-208ENST00000583649 FCRL1Q96LA6 429 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 OXGR1Q96P68 337 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 BCL2L14Q9BZR8 327 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 CYSLTR2Q9NS75 346 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 B3GNT2Q9NY97 397 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 C1RLQ9NZP8 487 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 TMEM216Q9P0N5 145 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 CCL27Q9Y4X3 112 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 POMT1Q9Y6A1 747 aa9.43□□□□□ -0.9
CASC3-208ENST00000583649 RNF103-CHMP3A0A140T963 221 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 M0R3G1 203 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 RAD51CO43502 376 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 CLPXO76031 633 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 TSPAN15O95858 294 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 SERPINA5P05154 406 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 SBK2P0C263 348 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 LAMP1P11279 417 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 ZNF250P15622 560 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 IL7RP16871 459 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 PRPS1L1P21108 318 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 CPT2P23786 658 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 RBMXP38159 391 aaKnown RBP9.42□□□□□ -0.9
CASC3-208ENST00000583649 GIPRP48546 466 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 ANXA11P50995 505 aaKnown RBP9.42□□□□□ -0.9
CASC3-208ENST00000583649 ZNF81P51508 661 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 RPS26P62854 115 aaKnown RBP9.42□□□□□ -0.9
CASC3-208ENST00000583649 MAPK14Q16539 360 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 MSMPQ1L6U9 139 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 TTMPQ5BVD1 217 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 ZMAT1Q5H9K5 638 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 KPRPQ5T749 579 aaPredicted RBP9.42□□□□□ -0.9
CASC3-208ENST00000583649 C1orf140Q5VVS0 124 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 LIPMQ5VYY2 423 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 TYW3Q6IPR3 259 aaKnown RBP9.42□□□□□ -0.9
CASC3-208ENST00000583649 OR7A2PQ8NGA2 310 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 MFSD8Q8NHS3 518 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 TBC1D15Q8TC07 691 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 DYRK2Q92630 601 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 ROPN1LQ96C74 230 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 THOC1Q96FV9 657 aaKnown RBP9.42□□□□□ -0.9
CASC3-208ENST00000583649 SLC19A3Q9BZV2 496 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 CACYBPQ9HB71 228 aaKnown RBP9.42□□□□□ -0.9
CASC3-208ENST00000583649 CDH20Q9HBT6 801 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 MMP26Q9NRE1 261 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 TNFRSF19Q9NS68 423 aa9.42□□□□□ -0.9
CASC3-208ENST00000583649 KMT2CQ8NEZ4 4911 aaKnown RBP9.41□□□□□ -0.9
CASC3-208ENST00000583649 IGLV3-9A0A075B6K5 115 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 CENPVL1A0A0U1RR11 272 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 ZNF503-AS2A6NEH8 195 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 AP3D1O14617 1153 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 TGDSO95455 350 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 VSIG8P0DPA2 414 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 CRHR1P34998 444 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 LARS2Q15031 903 aaKnown RBP9.41□□□□□ -0.9
CASC3-208ENST00000583649 TBC1D28Q2M2D7 210 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 RUSC1-AS1Q66K80 236 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 WBP2NLQ6ICG8 309 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 RNF165Q6ZSG1 346 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 FRMD7Q6ZUT3 714 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 DPPA2Q7Z7J5 298 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 DDIASQ8IXT1 998 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 CADM2Q8N3J6 435 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 ICA1LQ8NDH6 482 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 STK35Q8TDR2 534 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 SLC25A36Q96CQ1 311 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 LRR1Q96L50 414 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 PPP3R2Q96LZ3 170 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 DUSP26Q9BV47 211 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 OR51I1Q9H343 314 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 ARMC7Q9H6L4 198 aa9.41□□□□□ -0.9
CASC3-208ENST00000583649 CGGBP1Q9UFW8 167 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms