RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 BMP7P18075 431 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 CD53P19397 219 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 GSTM3P21266 225 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 SFTPDP35247 375 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 IDUAP35475 653 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 TIMP3P35625 211 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 STARP49675 285 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 AQP4P55087 323 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 TPD52P55327 224 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-209ENST00000571558 CLDN18P56856 261 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 SF3B4Q15427 424 aaKnown RBP eCLIP12.24□□□□□ -0.455e-17■■■■■ 28.1
RPAIN-209ENST00000571558 BCL2A1Q16548 175 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 VASNQ6EMK4 673 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 IZUMO2Q6UXV1 221 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 GALNT5Q7Z7M9 940 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 OR13C2Q8NGS9 318 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 DNAJA3Q96EY1 480 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 KLHL15Q96M94 604 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 OR5B2Q96R09 309 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 VCXQ9H320 206 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 FKRPQ9H9S5 495 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 ALKBH4Q9NXW9 302 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 SMPD3Q9NY59 655 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-209ENST00000571558 ZNF229Q9UJW7 825 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 SIGLEC7Q9Y286 467 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 TRAPPC4Q9Y296 219 aa12.24□□□□□ -0.45
RPAIN-209ENST00000571558 A0A1W2PNR3 127 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 UNC119BA6NIH7 251 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 SNAP29O95721 258 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 PMS2P2O95744 297 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 IGFBP1P08833 259 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-209ENST00000571558 TFPIP10646 304 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 OSMP13725 252 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 ZNF708P17019 499 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 BMP5P22003 454 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 CEACAM8P31997 349 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-209ENST00000571558 POLR2IP36954 125 aaKnown RBP12.23□□□□□ -0.45
RPAIN-209ENST00000571558 SLC9A3P48764 834 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 SUCLG1P53597 346 aaKnown RBP12.23□□□□□ -0.45
RPAIN-209ENST00000571558 RFX4Q33E94 735 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 PRSS57Q6UWY2 283 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 ZNF620Q6ZNG0 422 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 TMPPEQ6ZT21 453 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 RASSF6Q6ZTQ3 369 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 CLDN22Q8N7P3 220 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 RELL2Q8NC24 303 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-209ENST00000571558 ABTB1Q969K4 478 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-209ENST00000571558 TOR3AQ9H497 397 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 EXO5Q9H790 373 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 NANSQ9NR45 359 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 IL20Q9NYY1 176 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 SEC14L4Q9UDX3 406 aa12.23□□□□□ -0.45
RPAIN-209ENST00000571558 FREM3P0C091 2139 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 GJE1A6NN92 205 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 CLCA1A8K7I4 914 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 SAGP10523 405 aaPredicted RBP12.22□□□□□ -0.45
RPAIN-209ENST00000571558 CPN1P15169 458 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 EPHA2P29317 976 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 DIO1P49895 249 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 RAD23AP54725 363 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 ESRRGP62508 458 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 OR7A5Q15622 319 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 ZBED5Q49AG3 693 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 ESPNLQ6ZVH7 1005 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 OAFQ86UD1 273 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 C10orf53Q8N6V4 93 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 OR8D4Q8NGM9 314 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 SMPDL3BQ92485 455 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 TNFRSF13CQ96RJ3 184 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 TIMP4Q99727 224 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 PLA2G12AQ9BZM1 189 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 GRIP2Q9C0E4 1043 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 EGLN3Q9H6Z9 239 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 MRPL39Q9NYK5 338 aaKnown RBP12.22□□□□□ -0.45
RPAIN-209ENST00000571558 HIF3AQ9Y2N7 669 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 CDH10Q9Y6N8 788 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 MPDZO75970 2070 aa12.22□□□□□ -0.45
RPAIN-209ENST00000571558 TRAV27A0A087WT01 109 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 M0R082 166 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 TNFSF11O14788 317 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 SOX14O95416 240 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 IL2RAP01589 272 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 GRPRP30550 384 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 P2RY4P51582 365 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 H3F3AP84243 136 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 NPRL3Q12980 569 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 MFSD13AQ14CX5 517 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 SGCBQ16585 318 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 ZNF239Q16600 458 aaKnown RBP12.21□□□□□ -0.45
RPAIN-209ENST00000571558 ZIK1Q3SY52 487 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-209ENST00000571558 ANKDD1AQ495B1 522 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 SEM1Q6ZVN7 128 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 CXorf67Q86X51 503 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-209ENST00000571558 SCAIQ8N9R8 606 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 ADPRHL1Q8NDY3 354 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 OR51A7Q8NH64 312 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 OR2V1Q8NHB1 315 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 ZNF417Q8TAU3 575 aa12.21□□□□□ -0.45
RPAIN-209ENST00000571558 PIGTQ969N2 578 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms