RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 COL2A1P02458 1487 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SNED1Q8TER0 1413 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 A0A1B0GV72 72 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 FXYD1O00168 92 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 GPR31O00270 319 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 TERTO14746 1132 aaKnown RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 XRCC3O43542 346 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 CIDEAO60543 219 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 LIMS3P0CW19 117 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 LIMS4P0CW20 117 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF728P0DKX0 622 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 PCMT1P22061 227 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ARRB2P32121 409 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ADRA1AP35348 466 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 CTXN1P60606 82 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SURF2Q15527 256 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 FAM74A1Q5RGS3 127 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SLC25A30Q5SVS4 291 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 PHOSPHO1Q8TCT1 267 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SMOQ99835 787 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 TMEM59Q9BXS4 323 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 TDP1Q9NUW8 608 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 CXXC1Q9P0U4 656 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 PADI1Q9ULC6 663 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF354AO60765 605 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ARNTP27540 789 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 GPR18Q14330 331 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SHEQ5VZ18 495 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 C22orf39Q6P5X5 142 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 PHOSPHO2Q8TCD6 241 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SGPP1Q9BX95 441 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SEC61A2Q9H9S3 476 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 BCL2L10Q9HD36 194 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 GPR52Q9Y2T5 361 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 FCF1Q9Y324 198 aaKnown RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 IFITM5A6NNB3 132 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 DCTN6O00399 190 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 SLC31A2O15432 143 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 PPP1R3DO95685 299 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 MBPP02686 304 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-216ENST00000569240 ARRB1P49407 418 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-216ENST00000569240 GSG1Q2KHT4 349 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 SLC24A4Q8NFF2 622 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 OR51A4Q8NGJ6 313 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 OR14A16Q8NHC5 309 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 NUDCD2Q8WVJ2 157 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 FAM210BQ96KR6 192 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 NECTIN4Q96NY8 510 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 EXOGQ9Y2C4 368 aaKnown RBP6.59□□□□□ -1.35
CNOT1-216ENST00000569240 COL1A1P02452 1464 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-216ENST00000569240 ANKUB1A6NFN9 424 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 SOX1O00570 391 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-216ENST00000569240 CCSO14618 274 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 PPM1DO15297 605 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 DCAF7P61962 342 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 TBPL1P62380 186 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 ENTPD8Q5MY95 495 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 SAPCD1Q5SSQ6 148 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 TMPRSS11FQ6ZWK6 438 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 USP50Q70EL3 339 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-216ENST00000569240 RPS27LQ71UM5 84 aaKnown RBP6.59□□□□□ -1.35
CNOT1-216ENST00000569240 DND1Q8IYX4 353 aaKnown RBP6.59□□□□□ -1.35
CNOT1-216ENST00000569240 CFAP52Q8N1V2 620 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF738Q8NE65 137 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 OR51Q1Q8NH59 317 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 ADIPOR1Q96A54 375 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 POFUT1Q9H488 388 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 PARP11Q9NR21 331 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 KIR2DS1A0A191URI9 304 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 EDDM13A0A1B0GTR0 161 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 GRXCR1A8MXD5 290 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 DEDDO75618 318 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 SCO1O75880 301 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 GALTP07902 379 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 SLC25A4P12235 298 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 DAOP14920 347 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 FUT1P19526 365 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 KIR2DS4P43632 304 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 ATP1B3P54709 279 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 KIR2DS1Q14954 304 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 BTNL3Q6UXE8 466 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 Q6ZTK2 550 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 FIBINQ8TAL6 211 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 CIB3Q96Q77 187 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-216ENST00000569240 LMF1Q96S06 567 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 SERINC2Q96SA4 455 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 TRMT61BQ9BVS5 477 aaKnown RBP6.59□□□□□ -1.35
CNOT1-216ENST00000569240 NUDT9Q9BW91 350 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 PRSS16Q9NQE7 514 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 UBQLN4Q9NRR5 601 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 AK3Q9UIJ7 227 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 XRN1Q8IZH2 1706 aaKnown RBP6.59□□□□□ -1.35
CNOT1-216ENST00000569240 TMEM265A0A087WTH1 108 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 LMO2P25791 158 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 SIM1P81133 766 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-216ENST00000569240 PLGLB1Q02325 96 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 NSUN5P2Q63ZY6 315 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 Q6ZSR9 355 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 CERS5Q8N5B7 392 aa6.59□□□□□ -1.35
CNOT1-216ENST00000569240 OR52I2Q8NH67 350 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms