RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 USB1Q9BQ65 265 aaKnown RBP11.84□□□□□ -0.51
CDH1-204ENST00000562118 CHID1Q9BWS9 393 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 HDHD5Q9BXW7 423 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 SLC7A10Q9NS82 523 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 SIGLEC7Q9Y286 467 aa11.84□□□□□ -0.51
CDH1-204ENST00000562118 C16orf97H3BN30 126 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 STAMBPO95630 424 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 NQO1P15559 274 aaKnown RBP11.83□□□□□ -0.52
CDH1-204ENST00000562118 PPP3CBP16298 524 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 FPR3P25089 353 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 POU3F1Q03052 451 aaPredicted RBP11.83□□□□□ -0.52
CDH1-204ENST00000562118 GABPB1Q06547 395 aaPredicted RBP11.83□□□□□ -0.52
CDH1-204ENST00000562118 DAZAP2Q15038 168 aaPredicted RBP11.83□□□□□ -0.52
CDH1-204ENST00000562118 TAF11Q15544 211 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 ARMC4Q5T2S8 1044 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 CASP12Q6UXS9 341 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 MEX3BQ6ZN04 569 aaKnown RBP11.83□□□□□ -0.52
CDH1-204ENST00000562118 C22orf34Q6ZV56 151 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 ZNF627Q7L945 461 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 LINGO2Q7L985 606 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 AAED1Q7RTV5 226 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 CXorf67Q86X51 503 aaPredicted RBP11.83□□□□□ -0.52
CDH1-204ENST00000562118 LINC00471Q8N535 108 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 C1orf162Q8NEQ5 155 aaPredicted RBP11.83□□□□□ -0.52
CDH1-204ENST00000562118 ADAD1Q96M93 576 aaKnown RBP11.83□□□□□ -0.52
CDH1-204ENST00000562118 ALPK1Q96QP1 1244 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 MRPL13Q9BYD1 178 aaKnown RBP11.83□□□□□ -0.52
CDH1-204ENST00000562118 MCCC2Q9HCC0 563 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 ARMC1Q9NVT9 282 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 CSMD1Q96PZ7 3565 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 PRR14LQ5THK1 2151 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 ABCA12Q86UK0 2595 aa11.83□□□□□ -0.52
CDH1-204ENST00000562118 LRBAP50851 2863 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 RAI1Q7Z5J4 1906 aaPredicted RBP11.82□□□□□ -0.52
CDH1-204ENST00000562118 PDZD2O15018 2839 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 EFCAB9A8MZ26 197 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 HNRNPRO43390 633 aaKnown RBP11.82□□□□□ -0.52
CDH1-204ENST00000562118 AKAP8O43823 692 aaKnown RBP11.82□□□□□ -0.52
CDH1-204ENST00000562118 FKBP6O75344 327 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 ADAP00813 363 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 THBDP07204 575 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 MPGP29372 298 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 AQP2P41181 271 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 GPR4P46093 362 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 CLDN17P56750 224 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 PRPS1P60891 318 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 ACTR3P61158 418 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 EXOC3L2Q2M3D2 409 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 FGD3Q5JSP0 725 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 HIST2H2BCQ6DN03 193 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 PGBD2Q6P3X8 592 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 FAM122BQ7Z309 247 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 C20orf196Q8IYI0 205 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 ZNF100Q8IYN0 542 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 C10orf53Q8N6V4 93 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 OR13C2Q8NGS9 318 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 OR52J3Q8NH60 311 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 MOSPD2Q8NHP6 518 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 ASB10Q8WXI3 467 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 TMEM54Q969K7 222 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 NMD3Q96D46 503 aaKnown RBP11.82□□□□□ -0.52
CDH1-204ENST00000562118 FAM46AQ96IP4 442 aaKnown RBP11.82□□□□□ -0.52
CDH1-204ENST00000562118 TXNDC15Q96J42 360 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 MUS81Q96NY9 551 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 ASB6Q9NWX5 421 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 MED29Q9NX70 200 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 TAS2R16Q9NYV7 291 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 CRIM1Q9NZV1 1036 aa11.82□□□□□ -0.52
CDH1-204ENST00000562118 C6orf203Q9P0P8 240 aaPredicted RBP11.82□□□□□ -0.52
CDH1-204ENST00000562118 SH3D21A4FU49 640 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 SLC35F4A4IF30 521 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 TUBAL3A6NHL2 446 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 CLOCKO15516 846 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 SLC43A1O75387 559 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 UPK3AO75631 287 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 HIST1H2ABP04908 130 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 PGA4P0DJD7 388 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 PGA3P0DJD8 388 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 EPXP11678 715 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 COX6B1P14854 86 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 IFNGR1P15260 489 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 CRYGSP22914 178 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 LOXP28300 417 aaPredicted RBP11.81□□□□□ -0.52
CDH1-204ENST00000562118 KIR2DL3P43628 341 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 FOXG1P55316 489 aaPredicted RBP11.81□□□□□ -0.52
CDH1-204ENST00000562118 TSPAN31Q12999 210 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 GABRA6Q16445 453 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 ZBED5Q49AG3 693 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 ZNF787Q6DD87 383 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 NIPAL3Q6P499 406 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 CD300LDQ6UXZ3 194 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 SLC35D2Q76EJ3 337 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 HIST3H2AQ7L7L0 130 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 SSX8Q7RTT4 187 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.81□□□□□ -0.52
CDH1-204ENST00000562118 OAFQ86UD1 273 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 P2RY8Q86VZ1 359 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 SPATA24Q86W54 205 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 C17orf78Q8N4C9 275 aa11.81□□□□□ -0.52
CDH1-204ENST00000562118 STEAP2Q8NFT2 490 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms