RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 DPRXA6NFQ7 191 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 OR5H1A6NKK0 313 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 KIAA1324LA8MWY0 1029 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-214ENST00000560402 HNRNPCL2B2RXH8 293 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 HNRNPCL3B7ZW38 293 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 SULT2B1O00204 365 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 GPR171O14626 319 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 TLX2O43763 284 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-214ENST00000560402 PGM3O95394 542 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 PMS2P2O95744 297 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 TP53P04637 393 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-214ENST00000560402 HNRNPCL4P0DMR1 293 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 ETS2P15036 469 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 IGHV1-2P23083 117 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 CDKN1AP38936 164 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 CLK1P49759 484 aaKnown RBP11.97□□□□□ -0.49
SMAD3-214ENST00000560402 CASP9P55211 416 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 KCNJ10P78508 379 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 PGGHGQ32M88 737 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 KCTD21Q4G0X4 260 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 AP1ARQ63HQ0 302 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 GRINAQ7Z429 371 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 C8orf59Q8N0T1 100 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF563Q8TA94 476 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 SLC38A5Q8WUX1 472 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 XAGE5Q8WWM1 108 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 TAMM41Q96BW9 452 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF524Q96C55 264 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 HS6ST2Q96MM7 605 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 REG4Q9BYZ8 158 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 CHRNA9Q9UGM1 479 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 KCNE5Q9UJ90 142 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 BLOC1S6Q9UL45 172 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 MKLN1Q9UL63 735 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 SLC9A8Q9Y2E8 581 aa11.97□□□□□ -0.49
SMAD3-214ENST00000560402 SONP18583 2426 aaKnown RBP11.96□□□□□ -0.49
SMAD3-214ENST00000560402 CENPVL1A0A0U1RR11 272 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 SHISA9B4DS77 424 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 RNF223E7ERA6 249 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 TNFRSF11BO00300 401 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 HMGN4O00479 90 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 FCMRO60667 390 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 CLPTM1O96005 669 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 OPN1SWP03999 348 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 TFPTP0C1Z6 253 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 OR12D1P0DN82 309 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 RHCEP18577 417 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 IFNA8P32881 189 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 HTR3AP46098 478 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 SLC16A1P53985 500 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 VLDLRP98155 873 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 SPIBQ01892 262 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 GPAT3Q53EU6 434 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 C1QTNF12Q5T7M4 302 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 AGAP6Q5VW22 663 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 FBXW9Q5XUX1 488 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 TMEM108Q6UXF1 575 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 DNM1P46Q6ZS02 220 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF433Q8N7K0 673 aaPredicted RBP11.96□□□□□ -0.49
SMAD3-214ENST00000560402 ATG16L2Q8NAA4 619 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 NEUROG1Q92886 237 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 RAB8BQ92930 207 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 APH1AQ96BI3 265 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 SAP130Q9H0E3 1048 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF556Q9HAH1 456 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 BCL2L10Q9HD36 194 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 CISD1Q9NZ45 108 aaKnown RBP11.96□□□□□ -0.49
SMAD3-214ENST00000560402 MALT1Q9UDY8 824 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 NOSIPQ9Y314 301 aaKnown RBP11.96□□□□□ -0.49
SMAD3-214ENST00000560402 ENPP4Q9Y6X5 453 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 ABCA1O95477 2261 aa11.96□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF716A6NP11 495 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 ABCD4O14678 606 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 SNAP29O95721 258 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 IGHV4-39P01824 125 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 TFPIP10646 304 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 ANXA8P13928 327 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 PTAFRP25105 342 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 ACVR1BP36896 505 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 FAPQ12884 760 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 TOP3AQ13472 1001 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-214ENST00000560402 TYW3Q6IPR3 259 aaKnown RBP11.95□□□□□ -0.5
SMAD3-214ENST00000560402 KLHL17Q6TDP4 642 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 FRRS1Q6ZNA5 592 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 CXXC5Q7LFL8 322 aaKnown RBP11.95□□□□□ -0.5
SMAD3-214ENST00000560402 ATG4DQ86TL0 474 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-214ENST00000560402 CMIPQ8IY22 773 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 ZNF786Q8N393 782 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 PIK3C3Q8NEB9 887 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 SPATA3Q8NHX4 192 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 GIPC3Q8TF64 312 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 C7orf34Q96L11 122 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 APOL4Q9BPW4 351 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 TOR3AQ9H497 397 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 VCX3AQ9NNX9 186 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 CTPS2Q9NRF8 586 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 KRT84Q9NSB2 600 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-214ENST00000560402 ASB6Q9NWX5 421 aa11.95□□□□□ -0.5
SMAD3-214ENST00000560402 TAS2R16Q9NYV7 291 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms