RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 HS3ST3B1Q9Y662 390 aa10.39□□□□□ -0.75
RAB5C-208ENST00000551338 PHF3Q92576 2039 aaKnown RBP10.39□□□□□ -0.75
RAB5C-208ENST00000551338 A0A0G2JK05 382 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 A0A1W2PRG6 482 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 LNP1A1A4G5 178 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 FUOMA2VDF0 154 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 TVP23AA6NH52 213 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 SHISA8B8ZZ34 492 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 ARHGEF9O43307 516 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 PFDN1O60925 122 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 FZD7O75084 574 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 FREM3P0C091 2139 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 PSKH1P11801 424 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 IMPDH2P12268 514 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 F8A1P23610 371 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 EDNRAP25101 427 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 MSX1P28360 303 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 SHC1P29353 583 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 AVPR2P30518 371 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 APOBEC1P41238 236 aaKnown RBP10.38□□□□□ -0.75
RAB5C-208ENST00000551338 BCAP31P51572 246 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 RPL27P61353 136 aaKnown RBP10.38□□□□□ -0.75
RAB5C-208ENST00000551338 PPP3R1P63098 170 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 DNASE1L3Q13609 305 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 ACKR1Q16570 336 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 PLPPR5Q32ZL2 321 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 GLYR1Q49A26 553 aaPredicted RBP10.38□□□□□ -0.75
RAB5C-208ENST00000551338 ZMAT1Q5H9K5 638 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 FAM27D1Q5T7N8 215 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 SLC6A19Q695T7 634 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 PXKQ7Z7A4 578 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 PM20D2Q8IYS1 436 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 OR6V1Q8N148 313 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 OR2M3Q8NG83 312 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 OR2Y1Q8NGV0 311 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 SNX33Q8WV41 574 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 AP3S1Q92572 193 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 RELTQ969Z4 430 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 RNF166Q96A37 237 aaPredicted RBP10.38□□□□□ -0.75
RAB5C-208ENST00000551338 SMIM19Q96E16 107 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 SYT4Q9H2B2 425 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 TXNIPQ9H3M7 391 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 SRA1Q9HD15 236 aaKnown RBP10.38□□□□□ -0.75
RAB5C-208ENST00000551338 ACOXLQ9NUZ1 547 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 RHBDL2Q9NX52 303 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 ETAA1Q9NY74 926 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 GNG8Q9UK08 70 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 VDAC3Q9Y277 283 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 LOXL2Q9Y4K0 774 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 FKBP7Q9Y680 259 aa10.38□□□□□ -0.75
RAB5C-208ENST00000551338 A0A1W2PQ72 361 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 PMS2P1A4D2B8 440 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 ZNF208O43345 1280 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 OR2T1O43869 369 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 EFNA2O43921 213 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 ITGA10O75578 1167 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 AKR7A3O95154 331 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 ABHD16AO95870 558 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 GPANK1O95872 356 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 CD59P13987 128 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 CFL1P23528 166 aaKnown RBP10.37□□□□□ -0.75
RAB5C-208ENST00000551338 AZGP1P25311 298 aaKnown RBP10.37□□□□□ -0.75
RAB5C-208ENST00000551338 FOLR3P41439 243 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 CASP3P42574 277 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 RPS11P62280 158 aaKnown RBP eCLIP10.37□□□□□ -0.75
RAB5C-208ENST00000551338 INSM1Q01101 510 aaPredicted RBP10.37□□□□□ -0.75
RAB5C-208ENST00000551338 CDC20Q12834 499 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 ZP4Q12836 540 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 MELKQ14680 651 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 INPP5JQ15735 1006 aaPredicted RBP10.37□□□□□ -0.75
RAB5C-208ENST00000551338 EXT1Q16394 746 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 DDI2Q5TDH0 399 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 RPL22L1Q6P5R6 122 aaKnown RBP10.37□□□□□ -0.75
RAB5C-208ENST00000551338 CEACAM19Q7Z692 300 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 FADS6Q8N9I5 356 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 POC5Q8NA72 575 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 TEX19Q8NA77 164 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 MFSD8Q8NHS3 518 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 M1APQ8TC57 530 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 SNRNP27Q8WVK2 155 aaKnown RBP10.37□□□□□ -0.75
RAB5C-208ENST00000551338 GHSRQ92847 366 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 ARL5BQ96KC2 179 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 MRGPRX4Q96LA9 322 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 CMKLR1Q99788 373 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 METTL7AQ9H8H3 244 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 SP140LQ9H930 580 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 SDHAF3Q9NRP4 125 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 VSX1Q9NZR4 365 aaPredicted RBP10.37□□□□□ -0.75
RAB5C-208ENST00000551338 B9D1Q9UPM9 204 aa10.37□□□□□ -0.75
RAB5C-208ENST00000551338 CHCHD2Q9Y6H1 151 aaPredicted RBP10.37□□□□□ -0.75
RAB5C-208ENST00000551338 DOCK10Q96BY6 2186 aa10.36□□□□□ -0.75
RAB5C-208ENST00000551338 IGLV1-36A0A0B4J1U3 117 aa10.36□□□□□ -0.75
RAB5C-208ENST00000551338 PRSS37A4D1T9 235 aa10.36□□□□□ -0.75
RAB5C-208ENST00000551338 ANKRD33BA6NCL7 494 aa10.36□□□□□ -0.75
RAB5C-208ENST00000551338 MS4A18H0YCH9 400 aa10.36□□□□□ -0.75
RAB5C-208ENST00000551338 PSMD9O00233 223 aa10.36□□□□□ -0.75
RAB5C-208ENST00000551338 XKRYO14609 159 aa10.36□□□□□ -0.75
RAB5C-208ENST00000551338 HPGDSO60760 199 aa10.36□□□□□ -0.75
RAB5C-208ENST00000551338 UPK3AO75631 287 aa10.36□□□□□ -0.75
RAB5C-208ENST00000551338 STK17BO94768 372 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms