RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 ASCC3Q8N3C0 2202 aaKnown RBP3.55□□□□□ -1.84
LIMA1-205ENST00000550592 MYH7BA7E2Y1 1941 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 FBN3Q75N90 2809 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 PATJQ8NI35 1801 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 GOLGA4Q13439 2230 aaKnown RBP3.54□□□□□ -1.84
LIMA1-205ENST00000550592 METTL21EPA6NDL7 271 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 HIDE1A8MVS5 230 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 MTX2O75431 263 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 ECI2O75521 394 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 LYPLA1O75608 230 aaPredicted RBP3.54□□□□□ -1.84
LIMA1-205ENST00000550592 GNA14O95837 355 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 IGHG4P01861 327 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 SEMG1P04279 462 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 PNMTP11086 282 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 VDAC1P21796 283 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 MMP11P24347 488 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 LAP3P28838 519 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 CXCL12P48061 93 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 ACTR1AP61163 376 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 AANATQ16613 207 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 ISXQ2M1V0 245 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 SLC25A52Q3SY17 297 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 TP53I3Q53FA7 332 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 KCNIP4Q6PIL6 250 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 CASC1Q6TDU7 716 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 TFAP2EQ6VUC0 442 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 RGS9BPQ6ZS82 235 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 VSTM4Q8IW00 320 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 TMEM123Q8N131 208 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 CLEC4FQ8N1N0 589 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 SVOPLQ8N434 492 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 MS4A14Q96JA4 679 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 ZNF184Q99676 751 aaPredicted RBP3.54□□□□□ -1.84
LIMA1-205ENST00000550592 SLC35A5Q9BS91 424 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 TMEM9BQ9NQ34 198 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 IL36GQ9NZH8 169 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 TMEM9Q9P0T7 183 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 WARS2Q9UGM6 360 aaKnown RBP3.54□□□□□ -1.84
LIMA1-205ENST00000550592 AK6Q9Y3D8 172 aaKnown RBP3.54□□□□□ -1.84
LIMA1-205ENST00000550592 KNTC1P50748 2209 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 FBN2P35556 2912 aa3.54□□□□□ -1.84
LIMA1-205ENST00000550592 SMIM28A0A1B0GU29 152 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 SPAARA0A1B0GVQ0 90 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 LRP5LA4QPB2 252 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 E7ESA3 106 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 TNFSF11O14788 317 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 PRKYO43930 277 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 LALBAP00709 142 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 IGKV3-15P01624 115 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 CAPN1P07384 714 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 CCDC166P0CW27 439 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 RNH1P13489 461 aaKnown RBP3.53□□□□□ -1.84
LIMA1-205ENST00000550592 TDO2P48775 406 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 PRKXP51817 358 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 UBE2HP62256 183 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 BCL2L1Q07817 233 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 SLC10A7Q0GE19 358 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 IL24Q13007 206 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 SRSF5Q13243 272 aaKnown RBP3.53□□□□□ -1.84
LIMA1-205ENST00000550592 C1orf61Q13536 156 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 CUL1Q13616 776 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 PDK3Q15120 406 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 CFAP221Q4G0U5 840 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 C9orf129Q5T035 196 aaKnown RBP3.53□□□□□ -1.84
LIMA1-205ENST00000550592 TMEM179Q6ZVK1 233 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 NLRP9Q7RTR0 991 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 PPP1R27Q86WC6 154 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 SKA3Q8IX90 412 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 MTURNQ8N3F0 131 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 ZCCHC7Q8N3Z6 543 aaKnown RBP3.53□□□□□ -1.84
LIMA1-205ENST00000550592 FBXL16Q8N461 479 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 PAQR8Q8TEZ7 354 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 TCTEX1D2Q8WW35 142 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 MRPS31Q92665 395 aaKnown RBP3.53□□□□□ -1.84
LIMA1-205ENST00000550592 COQ2Q96H96 371 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 RNF126Q9BV68 326 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 SPATA16Q9BXB7 569 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 EHD1Q9H4M9 534 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 RAB18Q9NP72 206 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 UFSP2Q9NUQ7 469 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 SMOXQ9NWM0 555 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 PLLPQ9Y342 182 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 F5P12259 2224 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 FREM2Q5SZK8 3169 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 LRRK2Q5S007 2527 aa3.53□□□□□ -1.84
LIMA1-205ENST00000550592 SIPA1L1O43166 1804 aa3.52□□□□□ -1.85
LIMA1-205ENST00000550592 SETD2Q9BYW2 2564 aaPredicted RBP3.52□□□□□ -1.85
LIMA1-205ENST00000550592 IGHV1OR15-1A0A075B7D0 117 aa3.52□□□□□ -1.85
LIMA1-205ENST00000550592 TRAV26-1A0A087WT03 109 aa3.52□□□□□ -1.85
LIMA1-205ENST00000550592 IGHV7-81A0A0B4J1V7 117 aa3.52□□□□□ -1.85
LIMA1-205ENST00000550592 E7ENQ6 273 aa3.52□□□□□ -1.85
LIMA1-205ENST00000550592 HCN1O60741 890 aa3.52□□□□□ -1.85
LIMA1-205ENST00000550592 TBL1XO60907 577 aa3.52□□□□□ -1.85
LIMA1-205ENST00000550592 N4BP1O75113 896 aaKnown RBP3.52□□□□□ -1.85
LIMA1-205ENST00000550592 HSPB1P04792 205 aaKnown RBP3.52□□□□□ -1.85
LIMA1-205ENST00000550592 ALOX5P09917 674 aa3.52□□□□□ -1.85
LIMA1-205ENST00000550592 POLR2EP19388 210 aaKnown RBP3.52□□□□□ -1.85
LIMA1-205ENST00000550592 IMPDH1P20839 514 aa3.52□□□□□ -1.85
LIMA1-205ENST00000550592 GRIA1P42261 906 aa3.52□□□□□ -1.85
LIMA1-205ENST00000550592 CHRNB3Q05901 458 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms