RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 TSSK4Q6SA08 328 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 TPRA1Q86W33 373 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 NR2C2APQ86WQ0 139 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 OR6V1Q8N148 313 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 FAM71CQ8NEG0 241 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 OR8J1Q8NGP2 316 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 SMAP2Q8WU79 429 aaPredicted RBP10.37□□□□□ -0.75
CDH4-201ENST00000543233 TMEM208Q9BTX3 173 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 FN3KRPQ9HA64 309 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 HRASLSQ9HDD0 168 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 DMRT3Q9NQL9 472 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 GPATCH2Q9NW75 528 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 KCNK6Q9Y257 313 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 DENND4CQ5VZ89 1909 aa10.37□□□□□ -0.75
CDH4-201ENST00000543233 AGR2O95994 175 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 ACP5P13686 325 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 SNRPBP14678 240 aaKnown RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 FABP4P15090 132 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 RAC2P15153 192 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 ACKR3P25106 362 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 RBM34P42696 430 aaKnown RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 CDX1P47902 265 aaPredicted RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 PRAMEF14Q5SWL7 426 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 RANBP3LQ86VV4 465 aaPredicted RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 NRROSQ86YC3 692 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 C16orf78Q8WTQ4 265 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 CDCA3Q99618 268 aaPredicted RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 PARD6GQ9BYG4 376 aaPredicted RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 DUSP15Q9H1R2 295 aaPredicted RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 ACKR4Q9NPB9 350 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 GPR52Q9Y2T5 361 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 LOC100509620A0A075B734 347 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 A8MVJ9 347 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 OR2A4O95047 310 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 CD96P40200 585 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 CD200P41217 278 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 PRKXP51817 358 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 SCARB2Q14108 478 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 INPP5JQ15735 1006 aaPredicted RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 LINC00303Q3SY05 128 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 KHDRBS2Q5VWX1 349 aaKnown RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 NSUN5P2Q63ZY6 315 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 OR2A2Q6IF42 318 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 VHLLQ6RSH7 139 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 AMZ2Q86W34 360 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 SLC44A3Q8N4M1 653 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 ZNF671Q8TAW3 534 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 OR2A7Q96R45 310 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 FAM117AQ9C073 453 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 SLC6A16Q9GZN6 736 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 TRIOBPQ9H2D6 2365 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 DUXAA6NLW8 204 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 KDM4EB2RXH2 506 aaPredicted RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 TCF21O43680 179 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 RPA2P15927 270 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 NME2P22392 152 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 PRPH2P23942 346 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 P2RY2P41231 377 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 PRKAG1P54619 331 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 ELAVL3Q14576 367 aaKnown RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 RNASE10Q5GAN6 216 aaKnown RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 ZNF626Q68DY1 528 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 TANGO2Q6ICL3 276 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 SFXN4Q6P4A7 337 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 NXPE4Q6UWF7 544 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 ERN2Q76MJ5 926 aaKnown RBP10.36□□□□□ -0.75
CDH4-201ENST00000543233 GPR137CQ8N3F9 429 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 SLC39A7Q92504 469 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 C5orf34Q96MH7 638 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 HSPA12BQ96MM6 686 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 NRIP2Q9BQI9 281 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 ZDHHC5Q9C0B5 715 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 ZNF350Q9GZX5 532 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 THSD1Q9NS62 852 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 SERGEFQ9UGK8 458 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 SLC35A3Q9Y2D2 325 aa10.36□□□□□ -0.75
CDH4-201ENST00000543233 ZNF705GA8MUZ8 300 aaPredicted RBP10.35□□□□□ -0.75
CDH4-201ENST00000543233 UBL3O95164 117 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 HOXB5P09067 269 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 RNH1P13489 461 aaKnown RBP10.35□□□□□ -0.75
CDH4-201ENST00000543233 CPN1P15169 458 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 HOXA5P20719 270 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 CCR8P51685 355 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 TAF13Q15543 124 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 OR7A5Q15622 319 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 ETFBKMTQ8IXQ9 262 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 NEK7Q8TDX7 302 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 LCORQ96JN0 433 aaPredicted RBP10.35□□□□□ -0.75
CDH4-201ENST00000543233 NECAB3Q96P71 396 aaPredicted RBP10.35□□□□□ -0.75
CDH4-201ENST00000543233 UBL7Q96S82 380 aaPredicted RBP10.35□□□□□ -0.75
CDH4-201ENST00000543233 ORAI3Q9BRQ5 295 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 ARHGAP9Q9BRR9 750 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 DDA1Q9BW61 102 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 NRSN2Q9GZP1 204 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 POLR2J3Q9H1A7 115 aaKnown RBP10.35□□□□□ -0.75
CDH4-201ENST00000543233 MBNL1Q9NR56 388 aaKnown RBP10.35□□□□□ -0.75
CDH4-201ENST00000543233 FAM86C1Q9NVL1 165 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 KLHL9Q9P2J3 617 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 TMEM238LA0A1B0GVL6 79 aa10.35□□□□□ -0.75
CDH4-201ENST00000543233 A0A1W2PP55 124 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms