RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PTH2RP49190 550 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 CCR4P51679 360 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 MAZP56270 477 aaKnown RBP14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 P2RX3P56373 397 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 IKZF1Q13422 519 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 COL28A1Q2UY09 1125 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 TCTE1Q5JU00 501 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 CDC20BQ86Y33 519 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 LSM14AQ8ND56 463 aaKnown RBP14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 OR2T4Q8NH00 348 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 C1orf216Q8TAB5 229 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 SYNPRQ8TBG9 265 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 MIB2Q96AX9 1013 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 DACT3Q96B18 629 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 HAVCR1Q96D42 359 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 GPR174Q9BXC1 333 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 UCK1Q9HA47 277 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 OR5V1Q9UGF6 321 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 GMEB2Q9UKD1 530 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 TMEM184BQ9Y519 407 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 ETV7Q9Y603 341 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 TMEM131Q92545 1883 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 OIP5O43482 229 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 LDOC1O95751 146 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 RAF1P04049 648 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 F13BP05160 661 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 CD1CP29017 333 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 MNDAP41218 407 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 ART1P52961 327 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 SLC37A1P57057 533 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 LTBQ06643 244 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 CAMK2BQ13554 666 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 ESCO2Q56NI9 601 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 APOOLQ6UXV4 268 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 SERPINA12Q8IW75 414 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 PIAS4Q8N2W9 510 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 ZNF680Q8NEM1 530 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 FAM174AQ8TBP5 190 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 PTPMT1Q8WUK0 201 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 NSMAFQ92636 917 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 MS4A3Q96HJ5 214 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 SLC46A1Q96NT5 459 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 SORCS2Q96PQ0 1159 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 TSPAN10Q9H1Z9 355 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 C12orf10Q9HB07 376 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 DLL4Q9NR61 685 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 NKIRAS2Q9NYR9 191 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 WSB2Q9NYS7 404 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 KLK11Q9UBX7 282 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 FOXJ3Q9UPW0 622 aa14.58□□□□□ -0.08
CHMP1A-202ENST00000535997 TRBV5-5A0A0J9YX44 114 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 C4orf47A7E2U8 309 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 CHURC1-FNTBB4DL54 471 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 PRKNO60260 465 aaPredicted RBP14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 SLC22A5O76082 557 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 ZNF432O94892 652 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 ABHD16AO95870 558 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 HPXP02790 462 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 SYPP08247 313 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 MST1P26927 711 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 FNTBP49356 437 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 CLDN12P56749 244 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 RAB30Q15771 203 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 TMEM69Q5SWH9 247 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 GPR139Q6DWJ6 353 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 SPRTNQ9H040 489 aaPredicted RBP14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 MRPL15Q9P015 296 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 LAMP5Q9UJQ1 280 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 MRTO4Q9UKD2 239 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 TMEM14AQ9Y6G1 99 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 USP34Q70CQ2 3546 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 DCTN6O00399 190 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 UTS2O95399 124 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 HIST1H2ABP04908 130 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 DNASE1P24855 282 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 LBX1P52954 281 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 RPL18Q07020 188 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 GRM7Q14831 915 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 ELOCQ15369 112 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 METTL11BQ5VVY1 283 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 LRRN1Q6UXK5 716 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 HIST3H2AQ7L7L0 130 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 DND1Q8IYX4 353 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 OR6V1Q8N148 313 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 FAM109AQ8N4B1 249 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 METTL27Q8N6F8 245 aaPredicted RBP14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 HIST1H2ACQ93077 130 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 CCDC74AQ96AQ1 378 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 MED30Q96HR3 178 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 SLC38A3Q99624 504 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 ZNF436Q9C0F3 470 aaPredicted RBP14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 ADAM19Q9H013 955 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 HEXA-AS1Q9H8Q6 139 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 ZNF346Q9UL40 294 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 KLHDC2Q9Y2U9 406 aa14.57□□□□□ -0.08
CHMP1A-202ENST00000535997 CACNA1IQ9P0X4 2223 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 ANKRD20A5PA0PJZ0 165 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 FITM1A5D6W6 292 aa14.56□□□□□ -0.08
CHMP1A-202ENST00000535997 ALOX5APP20292 161 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms