RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 ELOVL1Q9BW60 279 aa6.85□□□□□ -1.31
CASP4-212ENST00000533730 NANOGQ9H9S0 305 aa6.85□□□□□ -1.31
CASP4-212ENST00000533730 SEC61A2Q9H9S3 476 aa6.85□□□□□ -1.31
CASP4-212ENST00000533730 PAQR5Q9NXK6 330 aaPredicted RBP6.85□□□□□ -1.31
CASP4-212ENST00000533730 COQ3Q9NZJ6 369 aa6.85□□□□□ -1.31
CASP4-212ENST00000533730 VDAC3Q9Y277 283 aa6.85□□□□□ -1.31
CASP4-212ENST00000533730 ZNF443Q9Y2A4 671 aaPredicted RBP6.85□□□□□ -1.31
CASP4-212ENST00000533730 RPH3AQ9Y2J0 694 aaPredicted RBP6.85□□□□□ -1.31
CASP4-212ENST00000533730 SNX5Q9Y5X3 404 aa6.85□□□□□ -1.31
CASP4-212ENST00000533730 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 CENPVL1A0A0U1RR11 272 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 CFAP73A6NFT4 308 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 WIPF3A6NGB9 483 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 C17orf51A8MQB3 221 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 B4DXG7 233 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 AIM2O14862 343 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 GMFGO60234 142 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 EPPINO95925 133 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 IFNA14P01570 189 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 PABPC4LP0CB38 370 aaKnown RBP6.84□□□□□ -1.31
CASP4-212ENST00000533730 GP1BBP13224 206 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 PPP3CBP16298 524 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 ZNF708P17019 499 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 FKBP2P26885 142 aaKnown RBP6.84□□□□□ -1.31
CASP4-212ENST00000533730 PCGF2P35227 344 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 LHX2P50458 406 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 MNAT1P51948 309 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 DLX5P56178 289 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 CLDN18P56856 261 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 EEF1A1P68104 462 aaKnown RBP6.84□□□□□ -1.31
CASP4-212ENST00000533730 VEZF1Q14119 521 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 CAPRIN1Q14444 709 aaKnown RBP6.84□□□□□ -1.31
CASP4-212ENST00000533730 QPRTQ15274 297 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 ACSF3Q4G176 576 aaPredicted RBP6.84□□□□□ -1.31
CASP4-212ENST00000533730 ZNF311Q5JNZ3 666 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 NSUN5P2Q63ZY6 315 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 DHRS4L2Q6PKH6 230 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 CBLN3Q6UW01 205 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 RRM2BQ7LG56 351 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 OLIG3Q7RTU3 272 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 PATL1Q86TB9 770 aaKnown RBP6.84□□□□□ -1.31
CASP4-212ENST00000533730 LINC00346Q8IVM7 164 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 ZNF808Q8N4W9 903 aaPredicted RBP6.84□□□□□ -1.31
CASP4-212ENST00000533730 OR52L2PQ8NGH6 319 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 OR10A6Q8NH74 314 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 ZNF563Q8TA94 476 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 SLC25A43Q8WUT9 341 aaPredicted RBP6.84□□□□□ -1.31
CASP4-212ENST00000533730 RASSF5Q8WWW0 418 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 ASB5Q8WWX0 329 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 RAB40AQ8WXH6 277 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 RND1Q92730 232 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 MAL2Q969L2 176 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 ZG16BQ96DA0 208 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 RNF145Q96MT1 663 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 ZFP3Q96NJ6 502 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 TTYH2Q9BSA4 534 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 HDHD5Q9BXW7 423 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 IKZF5Q9H5V7 419 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 CALHM2Q9HA72 323 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 SCPEP1Q9HB40 452 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 SERINC1Q9NRX5 453 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 ACER3Q9NUN7 267 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 NDE1Q9NXR1 346 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 KLHL28Q9NXS3 571 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 MRPL15Q9P015 296 aaKnown RBP6.84□□□□□ -1.31
CASP4-212ENST00000533730 ZNF337Q9Y3M9 751 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 ADAM18Q9Y3Q7 739 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 CHST2Q9Y4C5 530 aa6.84□□□□□ -1.31
CASP4-212ENST00000533730 SPIN1Q9Y657 262 aaPredicted RBP6.84□□□□□ -1.31
CASP4-212ENST00000533730 ZNF407Q9C0G0 2248 aa6.84□□□□□ -1.32
CASP4-212ENST00000533730 NCKAP5O14513 1909 aa6.84□□□□□ -1.32
CASP4-212ENST00000533730 GTF3C1Q12789 2109 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 DNAJC13O75165 2243 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 HSPB2A8KAH6 182 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 FAM220BPB1ANY3 271 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 ZNHIT1O43257 154 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 ZG16O60844 167 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 OR2C1O95371 312 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 NTN1O95631 604 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 FCGR2AP12318 317 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 CDH2P19022 906 aaPredicted RBP6.83□□□□□ -1.32
CASP4-212ENST00000533730 TCEA1P23193 301 aaKnown RBP6.83□□□□□ -1.32
CASP4-212ENST00000533730 CHRNB4P30926 498 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 RYKP34925 604 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 TIMP3P35625 211 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 LIPAP38571 399 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 APOBEC1P41238 236 aaKnown RBP6.83□□□□□ -1.32
CASP4-212ENST00000533730 STARP49675 285 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 NUDT2P50583 147 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 COPZ1P61923 177 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 SRYQ05066 204 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 SRSF1Q07955 248 aaKnown RBP eCLIP6.83□□□□□ -1.32
CASP4-212ENST00000533730 PMPCAQ10713 525 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 FOXF1Q12946 379 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 SELENBP1Q13228 472 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 ALKBH1Q13686 389 aaKnown RBP6.83□□□□□ -1.32
CASP4-212ENST00000533730 SELPLGQ14242 412 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 HSPB2Q16082 182 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 NDUFAF6Q330K2 333 aa6.83□□□□□ -1.32
CASP4-212ENST00000533730 RABL3Q5HYI8 236 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms