RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 TRAV17A0A0B4J275 112 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 SLC22A31A6NKX4 558 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 FAM47E-STBD1D6RA91 191 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 J3QRE1 110 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 GPX5O75715 221 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 IL11P20809 199 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 PSMA1P25786 263 aaKnown RBP16.9■□□□□ 0.3
SMPD1-203ENST00000527275 BMXP51813 675 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 RPS7P62081 194 aaKnown RBP16.9■□□□□ 0.3
SMPD1-203ENST00000527275 RPS4XP62701 263 aaKnown RBP16.9■□□□□ 0.3
SMPD1-203ENST00000527275 DBPQ10586 325 aaPredicted RBP16.9■□□□□ 0.3
SMPD1-203ENST00000527275 TMED1Q13445 227 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 GXYLT1Q4G148 440 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 ARMC4Q5T2S8 1044 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 LIPKQ5VXJ0 399 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 PHC2Q8IXK0 858 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 KBTBD8Q8NFY9 601 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 ZBTB8AQ96BR9 441 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 MOGAT1Q96PD6 335 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 UBL7Q96S82 380 aaPredicted RBP16.9■□□□□ 0.3
SMPD1-203ENST00000527275 ISYNA1Q9NPH2 558 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 ERVK13-1Q9NX77 482 aa16.9■□□□□ 0.3
SMPD1-203ENST00000527275 SPIN1Q9Y657 262 aaPredicted RBP16.9■□□□□ 0.3
SMPD1-203ENST00000527275 A0A087WZY1 265 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 BLOC1S5-TXNDC5H3BN57 136 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 EFNA2O43921 213 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 SUSD5O60279 629 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 ITGB2P05107 769 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 HIST1H1CP16403 213 aaKnown RBP16.89■□□□□ 0.3
SMPD1-203ENST00000527275 CPEP16870 476 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 GDF1P27539 372 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 APOBEC1P41238 236 aaKnown RBP16.89■□□□□ 0.3
SMPD1-203ENST00000527275 SLC16A1P53985 500 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 LTBQ06643 244 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 ZFP62Q8NB50 900 aaPredicted RBP16.89■□□□□ 0.3
SMPD1-203ENST00000527275 FAM98AQ8NCA5 519 aaKnown RBP16.89■□□□□ 0.3
SMPD1-203ENST00000527275 OR4K13Q8NH42 304 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 KISS1RQ969F8 398 aaPredicted RBP16.89■□□□□ 0.3
SMPD1-203ENST00000527275 KTI12Q96EK9 354 aaPredicted RBP16.89■□□□□ 0.3
SMPD1-203ENST00000527275 ZNF649Q9BS31 505 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 JAM3Q9BX67 310 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 SLIRPQ9GZT3 109 aaKnown RBP16.89■□□□□ 0.3
SMPD1-203ENST00000527275 ZNF703Q9H7S9 590 aaPredicted RBP16.89■□□□□ 0.3
SMPD1-203ENST00000527275 NDUFB11Q9NX14 153 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 SEC14L4Q9UDX3 406 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 KLHL21Q9UJP4 597 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 ADAM18Q9Y3Q7 739 aa16.89■□□□□ 0.3
SMPD1-203ENST00000527275 CCDC182A6NF36 153 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 TRAPPC6AO75865 159 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 TSPAN19P0C672 248 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 CLUP10909 449 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 SLC2A5P22732 501 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 SRD5A2P31213 254 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 CD79BP40259 229 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 EIF1P41567 113 aaKnown RBP16.89■□□□□ 0.29
SMPD1-203ENST00000527275 ZNF485Q8NCK3 441 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 MOSPD2Q8NHP6 518 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 ARHGAP9Q9BRR9 750 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 NRIP3Q9NQ35 241 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 HIF3AQ9Y2N7 669 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 PCDHGB6Q9Y5F9 930 aa16.89■□□□□ 0.29
SMPD1-203ENST00000527275 TMEM72A0PK05 275 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 TMEM8BA6NDV4 472 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 ARPC3O15145 178 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 AQP2P41181 271 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 CRYBB2P43320 205 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 ZNF829Q3KNS6 432 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-203ENST00000527275 RAET1LQ5VY80 246 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 GDPGP1Q6ZNW5 385 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 LINC00299Q6ZSB3 139 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 YRDCQ86U90 279 aaKnown RBP16.88■□□□□ 0.29
SMPD1-203ENST00000527275 GTPBP8Q8N3Z3 284 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-203ENST00000527275 KLHL36Q8N4N3 616 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 KDF1Q8NAX2 398 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-203ENST00000527275 FAM83FQ8NEG4 500 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-203ENST00000527275 DNAJA3Q96EY1 480 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 OR11A1Q9GZK7 315 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 EXOSC4Q9NPD3 245 aaKnown RBP16.88■□□□□ 0.29
SMPD1-203ENST00000527275 B4GALT7Q9UBV7 327 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 FAM166BA8MTA8 275 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 GLSO94925 669 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-203ENST00000527275 ASAH2BP0C7U1 165 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 ADH6P28332 368 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 MAGEA5P43359 124 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 ERVK-25P63136 954 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 PLGLB1Q02325 96 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 TPBGQ13641 420 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 C1QL3Q5VWW1 255 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 ACBD7Q8N6N7 88 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 SDR9C7Q8NEX9 313 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 ATP6V1C2Q8NEY4 427 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 OR14L1PQ8NHC6 308 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 TAAR8Q969N4 342 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 GPX7Q96SL4 187 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-203ENST00000527275 TMEM185BQ9H7F4 350 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 STUB1Q9UNE7 303 aa16.88■□□□□ 0.29
SMPD1-203ENST00000527275 ZNF407Q9C0G0 2248 aa16.87■□□□□ 0.29
SMPD1-203ENST00000527275 C12orf71A8MTZ7 269 aa16.87■□□□□ 0.29
SMPD1-203ENST00000527275 IDH3BO43837 385 aa16.87■□□□□ 0.29
SMPD1-203ENST00000527275 GYPBP06028 91 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms