RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TAS2R5Q9NYW4 299 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 B3GALT5Q9Y2C3 310 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 MAGED1Q9Y5V3 778 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 HCFC1P51610 2035 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 FREM1Q5H8C1 2179 aa8.68□□□□□ -1.02
TOPBP1-209ENST00000513818 CLOCKO15516 846 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 MRPL33O75394 65 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 KRT36O76013 467 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 SOX14O95416 240 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 HIST1H2ABP04908 130 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 CRHP06850 196 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 IGFBP1P08833 259 aaPredicted RBP8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 IFNGR1P15260 489 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 AGAP20933 346 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 OR3A2P47893 321 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 SLC9A3P48764 834 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 BIDP55957 195 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 FXYD6P3P58550 94 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 RPS4XP62701 263 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 FAM27E3Q08E93 113 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 PDK3Q15120 406 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 POU4F3Q15319 338 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 SLC25A35Q3KQZ1 300 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 ALG10Q5BKT4 473 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 PHYHD1Q5SRE7 291 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 TSPO2Q5TGU0 170 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF770Q6IQ21 691 aaPredicted RBP8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 TMPRSS11FQ6ZWK6 438 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 HIST3H2AQ7L7L0 130 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 OAFQ86UD1 273 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF100Q8IYN0 542 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 RNF113BQ8IZP6 322 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 UBE2J2Q8N2K1 259 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 FANK1Q8TC84 345 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 HIST1H2ACQ93077 130 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 APH1AQ96BI3 265 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 PKP2Q99959 881 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 SF3B5Q9BWJ5 86 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 ENKD1Q9H0I2 346 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 SEMA6AQ9H2E6 1030 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 PIGMQ9H3S5 423 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 NTN4Q9HB63 628 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 KCNJ16Q9NPI9 418 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 JKAMPQ9P055 326 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 DNAJB9Q9UBS3 223 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 TMEM5Q9Y2B1 443 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 HIF3AQ9Y2N7 669 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 AP4S1Q9Y587 144 aa8.67□□□□□ -1.02
TOPBP1-209ENST00000513818 SPTAN1Q13813 2472 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 UNC119BA6NIH7 251 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 SAC3D1A6NKF1 404 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 A8MXE2 369 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 MCIDASD6RGH6 385 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 H7C1C5 153 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 GPR171O14626 319 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 MSTNO14793 375 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 KLF4O43474 513 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 UPK3AO75631 287 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 SEC14L2O76054 403 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 VAMP5O95183 116 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 IGF2P01344 180 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 GASTP01350 101 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 CD8BP10966 210 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 PRKACGP22612 351 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 FPR3P25089 353 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 LCN6P62502 163 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 ERVK-25P63136 954 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 RUNX1T1Q06455 604 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 DBPQ10586 325 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 CAMK2DQ13557 499 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 ATP6AP1Q15904 470 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 MICAQ29983 383 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 SLC35D2Q76EJ3 337 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 LINGO2Q7L985 606 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 CXorf67Q86X51 503 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 KIF18BQ86Y91 864 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 CDK20Q8IZL9 346 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 CLDN22Q8N7P3 220 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 LRRC75AQ8NAA5 344 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 ICA1LQ8NDH6 482 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 GNPDA2Q8TDQ7 276 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 LIPHQ8WWY8 451 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 RNASE6Q93091 150 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 POP5Q969H6 163 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 TMEM45BQ96B21 275 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 DUS3LQ96G46 650 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 TSPAN32Q96QS1 320 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 OR2M2Q96R28 347 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 NIPSNAP1Q9BPW8 284 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 TACO1Q9BSH4 297 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 KATNB1Q9BVA0 655 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 POLDIP3Q9BY77 421 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 EGLN3Q9H6Z9 239 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 YY1AP1Q9H869 796 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 GP6Q9HCN6 339 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 KRCC1Q9NPI7 259 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 PLSCR4Q9NRQ2 329 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 INIPQ9NRY2 104 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 SLC7A10Q9NS82 523 aa8.66□□□□□ -1.02
TOPBP1-209ENST00000513818 ARMC1Q9NVT9 282 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms