RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 OR9G1Q8NH87 305 aa1.92□□□□□ -2.1
LINC00616-202ENST00000505874 RUFY1Q96T51 708 aa1.92□□□□□ -2.1
LINC00616-202ENST00000505874 NPAS2Q99743 824 aa1.92□□□□□ -2.1
LINC00616-202ENST00000505874 ZNF430Q9H8G1 570 aaPredicted RBP1.92□□□□□ -2.1
LINC00616-202ENST00000505874 SMPD3Q9NY59 655 aaPredicted RBP1.92□□□□□ -2.1
LINC00616-202ENST00000505874 MARCOQ9UEW3 520 aaPredicted RBP1.92□□□□□ -2.1
LINC00616-202ENST00000505874 TRAF3IP3Q9Y228 551 aa1.92□□□□□ -2.1
LINC00616-202ENST00000505874 TRPM7Q96QT4 1865 aa1.92□□□□□ -2.1
LINC00616-202ENST00000505874 MYH9P35579 1960 aaKnown RBP1.92□□□□□ -2.1
LINC00616-202ENST00000505874 CCDC171Q6TFL3 1326 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 PDE4DIPQ5VU43 2346 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 MAST2Q6P0Q8 1798 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 IGHV2-70DA0A0C4DH43 119 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 E7ESA3 106 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 B4GALT5O43286 388 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 IGF1P05019 195 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 IGKV4-1P06312 121 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 HSPD1P10809 573 aaKnown RBP1.91□□□□□ -2.1
LINC00616-202ENST00000505874 CELP19835 753 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 LEPP41159 167 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 CXCL5P42830 114 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 VDAC2P45880 294 aaPredicted RBP1.91□□□□□ -2.1
LINC00616-202ENST00000505874 TRDNQ13061 729 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 GRB7Q14451 532 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 SF3A2Q15428 464 aaKnown RBP1.91□□□□□ -2.1
LINC00616-202ENST00000505874 IMMTQ16891 758 aaKnown RBP1.91□□□□□ -2.1
LINC00616-202ENST00000505874 RSPO1Q2MKA7 263 aaPredicted RBP1.91□□□□□ -2.1
LINC00616-202ENST00000505874 C12orf60Q5U649 245 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 FRMPD2BQ6IN97 320 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 C11orf71Q6IPW1 123 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 ZNF571Q7Z3V5 609 aaPredicted RBP1.91□□□□□ -2.1
LINC00616-202ENST00000505874 PCP2Q8IVA1 136 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 MMAAQ8IVH4 418 aaKnown RBP1.91□□□□□ -2.1
LINC00616-202ENST00000505874 ARRDC1Q8N5I2 433 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 Q8N976 141 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 NANPQ8TBE9 248 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 PNPT1Q8TCS8 783 aaKnown RBP1.91□□□□□ -2.1
LINC00616-202ENST00000505874 DTX3LQ8TDB6 740 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 TCTEX1D2Q8WW35 142 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 ST8SIA1Q92185 356 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 RPL3LQ92901 407 aaKnown RBP1.91□□□□□ -2.1
LINC00616-202ENST00000505874 NAT9Q9BTE0 207 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 ACAT2Q9BWD1 397 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 KRT23Q9C075 422 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 SELENOIQ9C0D9 397 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 ACTR8Q9H981 624 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 SIRT7Q9NRC8 400 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 CCL28Q9NRJ3 127 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 AGPAT5Q9NUQ2 364 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 TMOD2Q9NZR1 351 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 WDR19Q8NEZ3 1342 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 ZNF532Q9HCE3 1301 aa1.91□□□□□ -2.1
LINC00616-202ENST00000505874 NAV1Q8NEY1 1877 aa1.9□□□□□ -2.1
LINC00616-202ENST00000505874 LAMB1P07942 1786 aa1.9□□□□□ -2.1
LINC00616-202ENST00000505874 MYH7BA7E2Y1 1941 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 PTPRFP10586 1907 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 ATAD5Q96QE3 1844 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 IGKV1D-8A0A087WSZ0 117 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 IGHV1OR21-1A0A087WYE8 117 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 A0A0D9SFI3 127 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 KIR2DS1A0A191URI9 304 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 FAM170AA1A519 330 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 ERICH2A1L162 156 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 DDX39AO00148 427 aaKnown RBP1.9□□□□□ -2.11
LINC00616-202ENST00000505874 BET1O15155 118 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 TPST2O60704 377 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 BCAS2O75934 225 aaPredicted RBP1.9□□□□□ -2.11
LINC00616-202ENST00000505874 B3GAT3O94766 335 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 MT-ATP6P00846 226 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 CCDC192P0DO97 292 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 PAICSP22234 425 aaKnown RBP1.9□□□□□ -2.11
LINC00616-202ENST00000505874 CXCR2P25025 360 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 ANP32AP39687 249 aaKnown RBP1.9□□□□□ -2.11
LINC00616-202ENST00000505874 TDO2P48775 406 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 CNTN2Q02246 1040 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 KIR2DS1Q14954 304 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 BLOC1S2Q6QNY1 142 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 USP50Q70EL3 339 aaPredicted RBP1.9□□□□□ -2.11
LINC00616-202ENST00000505874 LHFPL4Q7Z7J7 247 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 CBWD2Q8IUF1 395 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 ZNF547Q8IVP9 402 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 FAM71CQ8NEG0 241 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 OR10G3Q8NGC4 313 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 ESR2Q92731 530 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 TMEM186Q96B77 213 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 ZBED3Q96IU2 234 aaPredicted RBP1.9□□□□□ -2.11
LINC00616-202ENST00000505874 FCRL1Q96LA6 429 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 ATP6V0BQ99437 205 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 GSDMCQ9BYG8 508 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 DHX33Q9H6R0 707 aaKnown RBP1.9□□□□□ -2.11
LINC00616-202ENST00000505874 DBNDD1Q9H9R9 158 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 AATFQ9NY61 560 aaKnown RBP eCLIP1.9□□□□□ -2.11
LINC00616-202ENST00000505874 NCOR1O75376 2440 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 MYH11P35749 1972 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 COL4A1P02462 1669 aa1.9□□□□□ -2.11
LINC00616-202ENST00000505874 COL1A1P02452 1464 aaPredicted RBP1.89□□□□□ -2.11
LINC00616-202ENST00000505874 IGLV11-55A0A075B6I3 123 aa1.89□□□□□ -2.11
LINC00616-202ENST00000505874 FAM230AA0A1W2PPH8 454 aa1.89□□□□□ -2.11
LINC00616-202ENST00000505874 E7EWF7 191 aa1.89□□□□□ -2.11
LINC00616-202ENST00000505874 SUPT3HO75486 399 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms