RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 HIST1H2AGP0C0S8 130 aaPredicted RBP4.26□□□□□ -1.73
RTN4-215ENST00000491592 SP9P0CG40 484 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 TRAPPC2P0DI81 140 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 TRAPPC2BP0DI82 140 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 PPIAL4GP0DN37 164 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ETFAP13804 333 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 MSH3P20585 1137 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ATP6V1B2P21281 511 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 HTR1EP28566 365 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 LAP3P28838 519 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 UGT2B10P36537 528 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 MMP12P39900 470 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 GPR12P47775 334 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 TNFSF10P50591 281 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 NR0B1P51843 470 aaKnown RBP4.26□□□□□ -1.73
RTN4-215ENST00000491592 NUDT6P53370 316 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 HSPA2P54652 639 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 TMPRSS3P57727 454 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 DEFA1P59665 94 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 DEFA3P59666 94 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 KRTAP10-11P60412 298 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ACTBP60709 375 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ACTA2P62736 377 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 HERV-K104P63124 156 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ACTG1P63261 375 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ACTG2P63267 376 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ACTC1P68032 377 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ACTA1P68133 377 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 IFITM2Q01629 132 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ZNF45Q02386 682 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 RAD51Q06609 339 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 SIGLEC14Q08ET2 396 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 TCP10Q12799 353 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 NFATC2Q13469 925 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 HNF4GQ14541 408 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 SF3B4Q15427 424 aaKnown RBP eCLIP4.26□□□□□ -1.734e-13■■■□□ 17.6
RTN4-215ENST00000491592 SYPL1Q16563 259 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 CTF1Q16619 201 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 CYP51A1Q16850 503 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 GLYR1Q49A26 553 aaPredicted RBP4.26□□□□□ -1.73
RTN4-215ENST00000491592 YIF1BQ5BJH7 314 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 MANEAQ5SRI9 462 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 CCNJQ5T5M9 372 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 LIPNQ5VXI9 398 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 XAF1Q6GPH4 301 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 SLC8B1Q6J4K2 584 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ZNF544Q6NX49 715 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 VITQ6UXI7 678 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 SLC16A12Q6ZSM3 486 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 MEPCEQ7L2J0 689 aaKnown RBP4.26□□□□□ -1.73
RTN4-215ENST00000491592 SERPINA11Q86U17 422 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 KCNMB4Q86W47 210 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 SERPINA9Q86WD7 417 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.26□□□□□ -1.73
RTN4-215ENST00000491592 GID4Q8IVV7 300 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ENTHD1Q8IYW4 607 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 APCDD1Q8J025 514 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 SVOPLQ8N434 492 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 HORMAD2Q8N7B1 307 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 BPIFB6Q8NFQ5 453 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 OR7A2PQ8NGA2 310 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 SPATA22Q8NHS9 363 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 VANGL1Q8TAA9 524 aaPredicted RBP4.26□□□□□ -1.73
RTN4-215ENST00000491592 TMEM239Q8WW34 195 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 PIH1D2Q8WWB5 315 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 SMPDL3BQ92485 455 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 SUSD6Q92537 303 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 PROX1Q92786 737 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 ATOH1Q92858 354 aaPredicted RBP4.26□□□□□ -1.73
RTN4-215ENST00000491592 HIST1H2ACQ93077 130 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 PSMG2Q969U7 264 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 CPNE4Q96A23 557 aaPredicted RBP4.26□□□□□ -1.73
RTN4-215ENST00000491592 TMEM143Q96AN5 459 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 RAB39BQ96DA2 213 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 PPP1R36Q96LQ0 422 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 SGK494Q96LW2 274 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 TSSK2Q96PF2 358 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 PPP1R2P1Q96PQ5 205 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 NODALQ96S42 347 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 CSF3RQ99062 836 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 VAT1Q99536 393 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 LMF2Q9BU23 707 aaKnown RBP4.26□□□□□ -1.73
RTN4-215ENST00000491592 FUNDC2Q9BWH2 189 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 TUBB1Q9H4B7 451 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 DHX35Q9H5Z1 703 aaKnown RBP4.26□□□□□ -1.73
RTN4-215ENST00000491592 SLA2Q9H6Q3 261 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 RAB18Q9NP72 206 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 RAB9BQ9NP90 201 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 IMP3Q9NV31 184 aaKnown RBP4.26□□□□□ -1.73
RTN4-215ENST00000491592 EPHA6Q9UF33 1036 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 OR14J1Q9UGF5 321 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 STOML2Q9UJZ1 356 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 POU2F3Q9UKI9 436 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 SCML1Q9UN30 329 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 PDE10AQ9Y233 779 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 KPTNQ9Y664 436 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 HSPE1-MOB4S4R3N1 261 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 MICAL3Q7RTP6 2002 aa4.26□□□□□ -1.73
RTN4-215ENST00000491592 IGLV5-39A0A0G2JS06 123 aa4.25□□□□□ -1.73
RTN4-215ENST00000491592 ZCWPW2A0A1B0GU75 182 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms