RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 SLC35A2P78381 396 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 LCN2P80188 198 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 CHRNEQ04844 493 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 ZNF154Q13106 437 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 GANABQ14697 944 aaKnown RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 ATP6AP1Q15904 470 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 FXNQ16595 210 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 PRAMEF9Q5VWM5 478 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 OR4F3Q6IEY1 312 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 GALNT18Q6P9A2 607 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 ZNF621Q6ZSS3 439 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 GGNQ86UU5 652 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 RIMKLAQ8IXN7 391 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 NATD1Q8N6N6 113 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 PAPD5Q8NDF8 572 aaKnown RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 TTLQ8NG68 377 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 OR52E4Q8NGH9 312 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 NT5CQ8TCD5 201 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 YIPF5Q969M3 257 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 SLCO4A1Q96BD0 722 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 PPCDCQ96CD2 204 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 MTERF3Q96E29 417 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 REXO5Q96IC2 774 aaKnown RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 CNBD2Q96M20 576 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 DOK1Q99704 481 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 CPPED1Q9BRF8 314 aaPredicted RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 TBCDQ9BTW9 1192 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 REXO4Q9GZR2 422 aaKnown RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 PAIP1Q9H074 479 aaKnown RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 MEGF9Q9H1U4 602 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 COQ10BQ9H8M1 238 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 SIRT5Q9NXA8 310 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 MRPL15Q9P015 296 aaKnown RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 SH3BP4Q9P0V3 963 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 SLAMF8Q9P0V8 285 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 BTNL2Q9UIR0 455 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 PURGQ9UJV8 347 aaKnown RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 RPS6KA6Q9UK32 745 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 BAG5Q9UL15 447 aa6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 MCTS1Q9ULC4 181 aaKnown RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 MRPS33Q9Y291 106 aaKnown RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 GPC6Q9Y625 555 aaPredicted RBP6.33□□□□□ -1.4
EXOSC3-206ENST00000489414 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 A0A1W2PR80 420 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 SAC3D1A6NKF1 404 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 H3BML4 177 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 CLIC1O00299 241 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 RNASET2O00584 256 aaKnown RBP6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 CYR61O00622 381 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 SEMA3DO95025 777 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 CPSF4O95639 269 aaKnown RBP6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 AIFM1O95831 613 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 LY6G6CO95867 125 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 TGFB1P01137 390 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 ZCCHC18P0CG32 403 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 GSTM2P28161 218 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 EIF1AXP47813 144 aaKnown RBP6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 RGS1Q08116 209 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 C2orf80Q0P641 193 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 STX4Q12846 297 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 SERTAD2Q14140 314 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 SELPLGQ14242 412 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 RAET1LQ5VY80 246 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 IKBIPQ70UQ0 350 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 COMMD6Q7Z4G1 85 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 SERPINA11Q86U17 422 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 COMTD1Q86VU5 262 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 ANKRD46Q86W74 232 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 ADGRG3Q86Y34 549 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 METTL4Q8N3J2 472 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 SLC16A11Q8NCK7 471 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 OR7A2PQ8NGA2 310 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 OR4A15Q8NGL6 344 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 RDH5Q92781 318 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 HGDQ93099 445 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 FBXL20Q96IG2 436 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 EGLN2Q96KS0 407 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 ZNF583Q96ND8 569 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 NODALQ96S42 347 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 CSF3RQ99062 836 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 MYCBPQ99417 103 aaPredicted RBP6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 CHID1Q9BWS9 393 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 C1QTNF6Q9BXI9 259 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 FAM192AQ9GZU8 254 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 REEP4Q9H6H4 257 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 MAGIXQ9H6Y5 334 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 KAT8Q9H7Z6 458 aaKnown RBP6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 NT5DC2Q9H857 520 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 MIEF1Q9NQG6 463 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 MMP26Q9NRE1 261 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 KLRF1Q9NZS2 232 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 ATP6V1HQ9UI12 483 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 SAMD4AQ9UPU9 718 aaKnown RBP6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 FOXJ3Q9UPW0 622 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 ORC6Q9Y5N6 252 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 V9GYQ6 96 aa6.32□□□□□ -1.4
EXOSC3-206ENST00000489414 TRBV5-3A0A0A0MS03 114 aa6.31□□□□□ -1.4
EXOSC3-206ENST00000489414 ADARB2-AS1A8MUL3 147 aa6.31□□□□□ -1.4
EXOSC3-206ENST00000489414 hCG_2039718K7EN88 272 aa6.31□□□□□ -1.4
EXOSC3-206ENST00000489414 GUCY1B2O75343 617 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms