RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 SLC15A2Q16348 729 aa1.28□□□□□ -2.2
RBM39-234ENST00000487604 HES5Q5TA89 166 aa1.28□□□□□ -2.2
RBM39-234ENST00000487604 RAET1GQ6H3X3 334 aa1.28□□□□□ -2.2
RBM39-234ENST00000487604 HSDL2Q6YN16 418 aa1.28□□□□□ -2.2
RBM39-234ENST00000487604 CLEC4FQ8N1N0 589 aa1.28□□□□□ -2.2
RBM39-234ENST00000487604 STPG2Q8N412 459 aa1.28□□□□□ -2.2
RBM39-234ENST00000487604 ZADH2Q8N4Q0 377 aa1.28□□□□□ -2.2
RBM39-234ENST00000487604 MRPL38Q96DV4 380 aaKnown RBP1.28□□□□□ -2.2
RBM39-234ENST00000487604 TVP23CQ96ET8 276 aa1.28□□□□□ -2.2
RBM39-234ENST00000487604 TSSK3Q96PN8 268 aa1.28□□□□□ -2.2
RBM39-234ENST00000487604 IL36GQ9NZH8 169 aa1.28□□□□□ -2.2
RBM39-234ENST00000487604 RAD51BO15315 384 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 TAPBPO15533 448 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 OR1F1O43749 312 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 SOX6P35712 828 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 MAP3K8P41279 467 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 P2RY1P47900 373 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 CYB561P49447 251 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 ZNF616Q08AN1 781 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 AP1B1Q10567 949 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 ERCC8Q13216 396 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 PGAP1Q75T13 922 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 MOB3BQ86TA1 216 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 STXBP6Q8NFX7 210 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 FAM3CQ92520 227 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 SULT4A1Q9BR01 284 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 ZNF717Q9BY31 904 aaPredicted RBP1.27□□□□□ -2.21
RBM39-234ENST00000487604 TMEM117Q9H0C3 514 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 REEP4Q9H6H4 257 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 YY1AP1Q9H869 796 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 MEAF6Q9HAF1 191 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 GPATCH2LQ9NWQ4 482 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 THUMPD1Q9NXG2 353 aaKnown RBP1.27□□□□□ -2.21
RBM39-234ENST00000487604 SORL1Q92673 2214 aa1.27□□□□□ -2.21
RBM39-234ENST00000487604 CEMIPQ8WUJ3 1361 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 FANCIQ9NVI1 1328 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 NEBLO76041 1014 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 FOLR1P15328 257 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 NAMPTP43490 491 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 CX3CR1P49238 355 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 SLC11A1P49279 550 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 AQP6Q13520 282 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 VGLL4Q14135 290 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 STRADAQ7RTN6 431 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 NARS2Q96I59 477 aaKnown RBP1.26□□□□□ -2.21
RBM39-234ENST00000487604 OXGR1Q96P68 337 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 TIMM29Q9BSF4 260 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 EDEM2Q9BV94 578 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 LHX5Q9H2C1 402 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 SAMSN1Q9NSI8 373 aaKnown RBP1.26□□□□□ -2.21
RBM39-234ENST00000487604 CHMP2BQ9UQN3 213 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 SIGLEC9Q9Y336 463 aa1.26□□□□□ -2.21
RBM39-234ENST00000487604 CIB4A0PJX0 185 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 LGALS9O00182 355 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 RASGRF2O14827 1237 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 CHADO15335 359 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 PTBP3O95758 552 aaKnown RBP1.25□□□□□ -2.21
RBM39-234ENST00000487604 CCNE2O96020 404 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 TGFBR1P36897 503 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 NUCB2P80303 420 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 OXA1LQ15070 435 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 C1QTNF12Q5T7M4 302 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 DUX4L9Q6RFH8 374 aaPredicted RBP1.25□□□□□ -2.21
RBM39-234ENST00000487604 KDM7AQ6ZMT4 941 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 RBM43Q6ZSC3 357 aaKnown RBP1.25□□□□□ -2.21
RBM39-234ENST00000487604 MSANTD4Q8NCY6 345 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 GEMIN6Q8WXD5 167 aaKnown RBP1.25□□□□□ -2.21
RBM39-234ENST00000487604 SH3YL1Q96HL8 342 aaPredicted RBP1.25□□□□□ -2.21
RBM39-234ENST00000487604 RIT2Q99578 217 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 CCT7Q99832 543 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 GABARAPL3Q9BY60 117 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 DPH5Q9H2P9 285 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 UGT1A7Q9HAW7 530 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 UGT1A10Q9HAW8 530 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 UGT1A8Q9HAW9 530 aa1.25□□□□□ -2.21
RBM39-234ENST00000487604 SCN1AP35498 2009 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 A0A1B0GW55 424 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 ZNF878C9JN71 531 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 XPO1O14980 1071 aaKnown RBP1.24□□□□□ -2.21
RBM39-234ENST00000487604 ZSCAN12O43309 604 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 SLC25A14O95258 325 aaPredicted RBP1.24□□□□□ -2.21
RBM39-234ENST00000487604 DUX4L2P0CJ85 424 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 DUX4L3P0CJ86 424 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 DUX4L5P0CJ88 424 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 DUX4L6P0CJ89 424 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 DUX4L7P0CJ90 424 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 MMP11P24347 488 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 ACADVLP49748 655 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 RPS21P63220 83 aaKnown RBP1.24□□□□□ -2.21
RBM39-234ENST00000487604 PJVKQ0ZLH3 352 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 IL15RAQ13261 267 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 BEND3Q5T5X7 828 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 LINC00336Q6ZUF6 198 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 SNX32Q86XE0 403 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 RTN4IP1Q8WWV3 396 aaPredicted RBP1.24□□□□□ -2.21
RBM39-234ENST00000487604 GIN1Q9NXP7 522 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 DUX4Q9UBX2 424 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 MMP17Q9ULZ9 603 aa1.24□□□□□ -2.21
RBM39-234ENST00000487604 PACSIN2Q9UNF0 486 aaPredicted RBP1.24□□□□□ -2.21
RBM39-234ENST00000487604 ARPC4-TTLL3A0A0A6YYG9 625 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms