RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 ZNF726A6NNF4 738 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 RPL36A-HNRNPH2H7BZ11 118 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 ACOT8O14734 319 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 RNF13O43567 381 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 LYZL6O75951 148 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 KRT36O76013 467 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 ITGA5P08648 1049 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 DNAJA1P31689 397 aaKnown RBP13.75□□□□□ -0.21
RPP40-206ENST00000483546 MS4A2Q01362 244 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 CHRNB3Q05901 458 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 TAF11Q15544 211 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 FAM98BQ52LJ0 330 aaKnown RBP13.75□□□□□ -0.21
RPP40-206ENST00000483546 BEX5Q5H9J7 111 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 FGD3Q5JSP0 725 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 TMEM200AQ86VY9 491 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 TMEM123Q8N131 208 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 GPR137CQ8N3F9 429 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 OR6X1Q8NH79 312 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 MUCL1Q96DR8 90 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 CLPTM1LQ96KA5 538 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 MUS81Q96NY9 551 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 OR2M2Q96R28 347 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 NDEL1Q9GZM8 345 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 B3GAT2Q9NPZ5 323 aa13.75□□□□□ -0.21
RPP40-206ENST00000483546 ABCA4P78363 2273 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 ITPR2Q14571 2701 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 A0A1W2PRG6 482 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 OR5H1A6NKK0 313 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 EFCAB9A8MZ26 197 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 CENPBD1B2RD01 187 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 C11orf98E9PRG8 122 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 BLOC1S5-TXNDC5H3BN57 136 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 GSC2O15499 205 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 PIP5K1CO60331 668 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 GADD45GO95257 159 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 THBDP07204 575 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 SAGP10523 405 aaPredicted RBP13.74□□□□□ -0.21
RPP40-206ENST00000483546 HLA-DOBP13765 273 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 DAP3P51398 398 aaKnown RBP13.74□□□□□ -0.21
RPP40-206ENST00000483546 NR1H2P55055 460 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 PRPS1P60891 318 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 RPS4XP62701 263 aaKnown RBP13.74□□□□□ -0.21
RPP40-206ENST00000483546 SPIBQ01892 262 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 RPL18Q07020 188 aaKnown RBP13.74□□□□□ -0.21
RPP40-206ENST00000483546 GK3PQ14409 553 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 STK11Q15831 433 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 ANKRD34AQ69YU3 496 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 HMBOX1Q6NT76 420 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 PODNL1Q6PEZ8 512 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 SLC35D2Q76EJ3 337 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 LINC00471Q8N535 108 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 SEPHS2Q99611 448 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 POLDIP3Q9BY77 421 aaKnown RBP13.74□□□□□ -0.21
RPP40-206ENST00000483546 CLEC4MQ9H2X3 399 aaPredicted RBP13.74□□□□□ -0.21
RPP40-206ENST00000483546 OBP2BQ9NPH6 170 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 INIPQ9NRY2 104 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 DCHS2Q6V1P9 2916 aa13.74□□□□□ -0.21
RPP40-206ENST00000483546 ALPK2Q86TB3 2170 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 NBPF19A0A087WUL8 3843 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 ABCA12Q86UK0 2595 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 SLC35F4A4IF30 521 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 RAD51DO75771 328 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 DIRAS1O95057 198 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 BCL10O95999 233 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 HRGP04196 525 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 RAP2AP10114 183 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 HOXB1P14653 301 aaPredicted RBP13.73□□□□□ -0.21
RPP40-206ENST00000483546 IFNGR1P15260 489 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 HOXC12P31275 282 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 IFNGR2P38484 337 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 FOXD4Q12950 439 aaPredicted RBP13.73□□□□□ -0.21
RPP40-206ENST00000483546 FLOT2Q14254 428 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 PPA1Q15181 289 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 TAB1Q15750 504 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 GABRA6Q16445 453 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 FBXW10Q5XX13 1052 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 OAFQ86UD1 273 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 C20orf196Q8IYI0 205 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 SLC25A44Q96H78 314 aaPredicted RBP13.73□□□□□ -0.21
RPP40-206ENST00000483546 ZC3HAV1LQ96H79 300 aaKnown RBP13.73□□□□□ -0.21
RPP40-206ENST00000483546 ALKBH3Q96Q83 286 aaPredicted RBP13.73□□□□□ -0.21
RPP40-206ENST00000483546 FUZQ9BT04 418 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 CADM1Q9BY67 442 aaKnown RBP13.73□□□□□ -0.21
RPP40-206ENST00000483546 MOV10Q9HCE1 1003 aaKnown RBP13.73□□□□□ -0.21
RPP40-206ENST00000483546 MED29Q9NX70 200 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 TMCC3Q9ULS5 477 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 EDARQ9UNE0 448 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 AMDHD2Q9Y303 409 aa13.73□□□□□ -0.21
RPP40-206ENST00000483546 MAGED1Q9Y5V3 778 aaPredicted RBP13.73□□□□□ -0.21
RPP40-206ENST00000483546 APCP25054 2843 aa13.72□□□□□ -0.21
RPP40-206ENST00000483546 TRBV4-1A0A0J9YWV2 114 aa13.72□□□□□ -0.21
RPP40-206ENST00000483546 SH3PXD2BA1X283 911 aa13.72□□□□□ -0.21
RPP40-206ENST00000483546 DEFB108AA8MXU0 73 aa13.72□□□□□ -0.21
RPP40-206ENST00000483546 CLOCKO15516 846 aa13.72□□□□□ -0.21
RPP40-206ENST00000483546 UPK3AO75631 287 aa13.72□□□□□ -0.21
RPP40-206ENST00000483546 SERPINI2O75830 405 aa13.72□□□□□ -0.21
RPP40-206ENST00000483546 NR2C1P13056 603 aa13.72□□□□□ -0.21
RPP40-206ENST00000483546 MAKP20794 623 aa13.72□□□□□ -0.21
RPP40-206ENST00000483546 FUT4P22083 530 aa13.72□□□□□ -0.21
RPP40-206ENST00000483546 RRM2P31350 389 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms