RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TXNDC15Q96J42 360 aa18.42■□□□□ 0.54
SEC13-217ENST00000482647 SEPHS2Q99611 448 aa18.42■□□□□ 0.54
SEC13-217ENST00000482647 POLDIP3Q9BY77 421 aaKnown RBP18.42■□□□□ 0.54
SEC13-217ENST00000482647 CLEC4MQ9H2X3 399 aaPredicted RBP18.42■□□□□ 0.54
SEC13-217ENST00000482647 MAGIXQ9H6Y5 334 aa18.42■□□□□ 0.54
SEC13-217ENST00000482647 CACNA1DQ01668 2161 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 FREM1Q5H8C1 2179 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 TCRBV5S2A0A599 114 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 ACOT8O14734 319 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 RAD51DO75771 328 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 ITGA5P08648 1049 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 SAGP10523 405 aaPredicted RBP18.41■□□□□ 0.54
SEC13-217ENST00000482647 IFNGR1P15260 489 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 RPL18Q07020 188 aaKnown RBP18.41■□□□□ 0.54
SEC13-217ENST00000482647 TAB1Q15750 504 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 STK11Q15831 433 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 TIMM23BQ5SRD1 257 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 SLC35D2Q76EJ3 337 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 PIWIL3Q7Z3Z3 882 aaKnown RBP18.41■□□□□ 0.54
SEC13-217ENST00000482647 WFDC8Q8IUA0 241 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 ZDHHC21Q8IVQ6 265 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 GPR137CQ8N3F9 429 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 C1orf162Q8NEQ5 155 aaPredicted RBP18.41■□□□□ 0.54
SEC13-217ENST00000482647 OR52J3Q8NH60 311 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 MUCL1Q96DR8 90 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 DHRS1Q96LJ7 313 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 ADAD1Q96M93 576 aaKnown RBP18.41■□□□□ 0.54
SEC13-217ENST00000482647 MUS81Q96NY9 551 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 MED29Q9NX70 200 aa18.41■□□□□ 0.54
SEC13-217ENST00000482647 SLC35F4A4IF30 521 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 OR5H1A6NKK0 313 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 EFCAB9A8MZ26 197 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 GSC2O15499 205 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 MAKP20794 623 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 AQP2P41181 271 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 FOXG1P55316 489 aaPredicted RBP18.4■□□□□ 0.54
SEC13-217ENST00000482647 KRTAP10-9P60411 292 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 SPIBQ01892 262 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 CHRNB3Q05901 458 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 LGALS3BPQ08380 585 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 GABRA6Q16445 453 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 ANKDD1AQ495B1 522 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 FAM98BQ52LJ0 330 aaKnown RBP18.4■□□□□ 0.54
SEC13-217ENST00000482647 C9orf135Q5VTT2 229 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 ALKBH2Q6NS38 261 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 HMBOX1Q6NT76 420 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 TMPRSS11FQ6ZWK6 438 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 TMEM123Q8N131 208 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 LRR1Q96L50 414 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 LURAP1Q96LR2 239 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 EMC6Q9BV81 110 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 NGBQ9NPG2 151 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 KRCC1Q9NPI7 259 aaPredicted RBP18.4■□□□□ 0.54
SEC13-217ENST00000482647 TMEM5Q9Y2B1 443 aa18.4■□□□□ 0.54
SEC13-217ENST00000482647 LRBAP50851 2863 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 TRBV4-1A0A0J9YWV2 114 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 A0A1W2PRG6 482 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 GADD45GO95257 159 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 HRGP04196 525 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 TSPAN19P0C672 248 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 SLC9A3P48764 834 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 BIDP55957 195 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 LAPTM4AQ15012 233 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 CARD17Q5XLA6 110 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 OAFQ86UD1 273 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 MEX3DQ86XN8 651 aaKnown RBP18.39■□□□□ 0.53
SEC13-217ENST00000482647 C20orf196Q8IYI0 205 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 OR6X1Q8NH79 312 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 ALKBH3Q96Q83 286 aaPredicted RBP18.39■□□□□ 0.53
SEC13-217ENST00000482647 CADM1Q9BY67 442 aaKnown RBP18.39■□□□□ 0.53
SEC13-217ENST00000482647 INIPQ9NRY2 104 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 HIF3AQ9Y2N7 669 aa18.39■□□□□ 0.53
SEC13-217ENST00000482647 AQP12BA6NM10 295 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 DEFB108AA8MXU0 73 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 RPL36A-HNRNPH2H7BZ11 118 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 M0R3G1 203 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 KRT36O76013 467 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 BCL10O95999 233 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 F13BP05160 661 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 CDH2P19022 906 aaPredicted RBP18.38■□□□□ 0.53
SEC13-217ENST00000482647 RRM2P31350 389 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 SH3BGRP55822 239 aaPredicted RBP18.38■□□□□ 0.53
SEC13-217ENST00000482647 ROR2Q01974 943 aaKnown RBP18.38■□□□□ 0.53
SEC13-217ENST00000482647 CAMK2DQ13557 499 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 PPA1Q15181 289 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 BEX5Q5H9J7 111 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 CDC20BQ86Y33 519 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 AQP12AQ8IXF9 295 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 C17orf78Q8N4C9 275 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 OR6N1Q8NGY5 312 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 OR51A7Q8NH64 312 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 MOSPD2Q8NHP6 518 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 PIK3IP1Q96FE7 263 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 FUZQ9BT04 418 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 B3GAT2Q9NPZ5 323 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 TMCC3Q9ULS5 477 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 MAST4O15021 2626 aa18.38■□□□□ 0.53
SEC13-217ENST00000482647 TEX15Q9BXT5 2789 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 SH3PXD2BA1X283 911 aa18.37■□□□□ 0.53
SEC13-217ENST00000482647 CLOCKO15516 846 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms