RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 OR2L13Q8N349 312 aa0.57□□□□□ -2.32
HPS3-205ENST00000478525 ZADH2Q8N4Q0 377 aa0.57□□□□□ -2.32
HPS3-205ENST00000478525 DHRSXQ8N5I4 330 aa0.57□□□□□ -2.32
HPS3-205ENST00000478525 ZNF680Q8NEM1 530 aa0.57□□□□□ -2.32
HPS3-205ENST00000478525 VN1R2Q8NFZ6 395 aa0.57□□□□□ -2.32
HPS3-205ENST00000478525 URGCPQ8TCY9 931 aa0.57□□□□□ -2.32
HPS3-205ENST00000478525 GABARAPL3Q9BY60 117 aa0.57□□□□□ -2.32
HPS3-205ENST00000478525 ATG10Q9H0Y0 220 aa0.57□□□□□ -2.32
HPS3-205ENST00000478525 NXF5Q9H1B4 397 aaKnown RBP0.57□□□□□ -2.32
HPS3-205ENST00000478525 ROPN1Q9HAT0 212 aaPredicted RBP0.57□□□□□ -2.32
HPS3-205ENST00000478525 CWC25Q9NXE8 425 aaPredicted RBP0.57□□□□□ -2.32
HPS3-205ENST00000478525 SIGLEC8Q9NYZ4 499 aa0.57□□□□□ -2.32
HPS3-205ENST00000478525 ARHGAP42A6NI28 874 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 CD74P04233 296 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 DCKP27707 260 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 COPB2P35606 906 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 ARF5P84085 180 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 PDIA2Q13087 525 aaKnown RBP0.56□□□□□ -2.32
HPS3-205ENST00000478525 IHHQ14623 411 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 GINS1Q14691 196 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 SMUG1Q53HV7 270 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 CIRBP-AS1Q8TBR5 109 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 FGF14Q92915 247 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 C2orf40Q9H1Z8 148 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 SYNDIG1Q9H7V2 258 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 YAE1D1Q9NRH1 226 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 HOXC10Q9NYD6 342 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 CALYQ9NYX4 217 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 STRAPQ9Y3F4 350 aaKnown RBP0.56□□□□□ -2.32
HPS3-205ENST00000478525 RPL36Q9Y3U8 105 aaKnown RBP0.56□□□□□ -2.32
HPS3-205ENST00000478525 SCN4AP35499 1836 aa0.56□□□□□ -2.32
HPS3-205ENST00000478525 CENPJQ9HC77 1338 aaPredicted RBP0.56□□□□□ -2.32
HPS3-205ENST00000478525 ADAMTS13Q76LX8 1427 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 MRPS12O15235 138 aaKnown RBP0.55□□□□□ -2.32
HPS3-205ENST00000478525 CSNK1A1P48729 337 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 CDH4P55283 916 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 PKNOX1P55347 436 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 LASP1Q14847 261 aaKnown RBP0.55□□□□□ -2.32
HPS3-205ENST00000478525 LDLRAP1Q5SW96 308 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 OR6B2Q6IFH4 312 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 CEMP1Q6PRD7 247 aaPredicted RBP0.55□□□□□ -2.32
HPS3-205ENST00000478525 TMEM136Q6ZRR5 245 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 DPY19L4Q7Z388 723 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 VSTM4Q8IW00 320 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 TMEM105Q8N8V8 129 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 DENND6BQ8NEG7 585 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 OR2L3Q8NG85 312 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 OR56B1Q8NGI3 324 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 OR13G1Q8NGZ3 307 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 MYLPFQ96A32 169 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 TMEM159Q96B96 161 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 VPS35Q96QK1 796 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 DESI2Q9BSY9 194 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 GSDMCQ9BYG8 508 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 UGT1A7Q9HAW7 530 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 UGT1A10Q9HAW8 530 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 UGT1A8Q9HAW9 530 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 ZNF639Q9UID6 485 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 NPIPA1Q9UND3 350 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 AK6Q9Y3D8 172 aaKnown RBP0.55□□□□□ -2.32
HPS3-205ENST00000478525 CEMIPQ8WUJ3 1361 aa0.55□□□□□ -2.32
HPS3-205ENST00000478525 COL22A1Q8NFW1 1626 aaPredicted RBP0.54□□□□□ -2.32
HPS3-205ENST00000478525 CFAP73A6NFT4 308 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 SDHDO14521 159 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 KINO60870 393 aaKnown RBP0.54□□□□□ -2.32
HPS3-205ENST00000478525 GCM2O75603 506 aaPredicted RBP0.54□□□□□ -2.32
HPS3-205ENST00000478525 APCSP02743 223 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 H2BFMP0C1H6 154 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 PCMT1P22061 227 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 AHCYP23526 432 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 SLC26A5P58743 744 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 IFT88Q13099 833 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 RPA4Q13156 261 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 POU2AF1Q16633 256 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 OR52E8Q6IFG1 317 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 ZNF493Q6ZR52 646 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 CENPUQ71F23 418 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 ZNF683Q8IZ20 524 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 MREGQ8N565 214 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 APCDD1LQ8NCL9 501 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 OR10A7Q8NGE5 316 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 C15orf40Q8WUR7 153 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 GEMIN6Q8WXD5 167 aaKnown RBP0.54□□□□□ -2.32
HPS3-205ENST00000478525 ZNF649Q9BS31 505 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 UBE2ZQ9H832 354 aaPredicted RBP0.54□□□□□ -2.32
HPS3-205ENST00000478525 ECT2Q9H8V3 914 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 ACTR8Q9H981 624 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 ISYNA1Q9NPH2 558 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 PSG8Q9UQ74 426 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 NUDCQ9Y266 331 aa0.54□□□□□ -2.32
HPS3-205ENST00000478525 ZNF716A6NP11 495 aa0.53□□□□□ -2.32
HPS3-205ENST00000478525 A8MUI8 341 aa0.53□□□□□ -2.32
HPS3-205ENST00000478525 C3orf84H3BNL1 204 aa0.53□□□□□ -2.32
HPS3-205ENST00000478525 KMOO15229 486 aa0.53□□□□□ -2.32
HPS3-205ENST00000478525 TOM1L1O75674 476 aa0.53□□□□□ -2.32
HPS3-205ENST00000478525 HLA-DQA1P01909 254 aa0.53□□□□□ -2.32
HPS3-205ENST00000478525 IGKV1-16P04430 117 aa0.53□□□□□ -2.32
HPS3-205ENST00000478525 RDXP35241 583 aaKnown RBP0.53□□□□□ -2.32
HPS3-205ENST00000478525 HPCAL1P37235 193 aa0.53□□□□□ -2.32
HPS3-205ENST00000478525 AP3M2P53677 418 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms