RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 FOXRED1Q96CU9 486 aaPredicted RBP13.06□□□□□ -0.32
NPHP4-208ENST00000478423 OR2A14Q96R47 310 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 PPIL3Q9H2H8 161 aaKnown RBP13.06□□□□□ -0.32
NPHP4-208ENST00000478423 PLCXD1Q9NUJ7 323 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 SPTBP11277 2137 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 TMEM129A0AVI4 362 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 AGAP14A8MT82 685 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 SELENOFO60613 162 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 MOSPD3O75425 235 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 GLCEO94923 617 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 DBHP09172 617 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 P2RX1P51575 399 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 TIAL1Q01085 375 aaKnown RBP eCLIP13.05□□□□□ -0.32
NPHP4-208ENST00000478423 FAHD1Q6P587 224 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 ESPNLQ6ZVH7 1005 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 NANOGP1Q8N7R0 232 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 NRIP3Q9NQ35 241 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 CMC2Q9NRP2 79 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 TRDV1A0A1B0GX56 115 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 LILRA5A6NI73 299 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 SLC43A1O75387 559 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 TSPAN9O75954 239 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 MT-ATP6P00846 226 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 HTR5AP47898 357 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 GP2P55259 537 aaKnown RBP13.05□□□□□ -0.32
NPHP4-208ENST00000478423 PCBD1P61457 104 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 ZMAT1Q5H9K5 638 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 C3orf33Q6P1S2 294 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 H1FNTQ75WM6 255 aaPredicted RBP13.05□□□□□ -0.32
NPHP4-208ENST00000478423 ELMOD2Q8IZ81 293 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 SPAG16Q8N0X2 631 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 DNAJC5GQ8N7S2 189 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 TET1Q8NFU7 2136 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 LRRC3BQ96PB8 259 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 CDC6Q99741 560 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 EMC6Q9BV81 110 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 CDCP1Q9H5V8 836 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 APMAPQ9HDC9 416 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 ZNF175Q9Y473 711 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 PCDHGA3Q9Y5H0 932 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 NUBP2Q9Y5Y2 271 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 KCNE3Q9Y6H6 103 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 ZC3H12DA2A288 527 aaKnown RBP13.05□□□□□ -0.32
NPHP4-208ENST00000478423 OTOL1A6NHN0 477 aaPredicted RBP13.05□□□□□ -0.32
NPHP4-208ENST00000478423 SNAPC5O75971 98 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 MT-ND4P03905 459 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 AKAIN1P0CW23 69 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 MSX1P28360 303 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 UQCRC1P31930 480 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 ETV5P41161 510 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 ETV1P50549 477 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 TATDN3Q17R31 274 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 AGAP6Q5VW22 663 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 GSG1LQ6UXU4 331 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 GRAMD2AQ8IUY3 354 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 KLHDC8BQ8IXV7 354 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 SLC43A2Q8N370 569 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 ZNF454Q8N9F8 522 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 LGALS14Q8TCE9 139 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 TM9SF4Q92544 642 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 COX14Q96I36 57 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 AGAP4Q96P64 663 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 SYT3Q9BQG1 590 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 SEMA4CQ9C0C4 833 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 OR51J1Q9H342 316 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 CHRNA9Q9UGM1 479 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 KCND3Q9UK17 655 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 AKR7A3O95154 331 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 ZNF806P0C7X5 589 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 NME1P15531 152 aaKnown RBP13.05□□□□□ -0.32
NPHP4-208ENST00000478423 AGTR1P30556 359 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 RPS19P39019 145 aaKnown RBP13.05□□□□□ -0.32
NPHP4-208ENST00000478423 MTNR1BP49286 362 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 CYB561P49447 251 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 GPNMBQ14956 572 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 UBE2UQ5VVX9 321 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 STEAP3Q658P3 488 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 SIRT6Q8N6T7 355 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 ACBD4Q8NC06 268 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 FKBP14Q9NWM8 211 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 CAMK2AQ9UQM7 478 aa13.05□□□□□ -0.32
NPHP4-208ENST00000478423 WNK3Q9BYP7 1800 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 EIF1BO60739 113 aaKnown RBP13.04□□□□□ -0.32
NPHP4-208ENST00000478423 EXT1Q16394 746 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 LIPNQ5VXI9 398 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 GOT1L1Q8NHS2 421 aaPredicted RBP13.04□□□□□ -0.32
NPHP4-208ENST00000478423 CPT1CQ8TCG5 803 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 PIGCQ92535 297 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 OR11A1Q9GZK7 315 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 DNTTIP1Q9H147 329 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 ATAD5Q96QE3 1844 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 A0A0G2JMP0 313 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 LIPCP11150 499 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 HIST1H1CP16403 213 aaKnown RBP13.04□□□□□ -0.32
NPHP4-208ENST00000478423 GABRR1P24046 479 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 CD163Q86VB7 1156 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 OR4M2Q8NGB6 313 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 RHNO1Q9BSD3 238 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 RNF167Q9H6Y7 350 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 FOCADQ5VW36 1801 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms