RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 IER3IP1Q9Y5U9 82 aa8.77□□□□□ -1.01
SF3A1-207ENST00000471342 SPIN1Q9Y657 262 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-207ENST00000471342 IGLV1-36A0A0B4J1U3 117 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 LOC100130705A0A1B0GUX0 176 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 OR6C68A6NDL8 312 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 CCDC182A6NF36 153 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 TTLL8A6PVC2 850 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF724A8MTY0 619 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 H0YAE9 185 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 BLOC1S5-TXNDC5H3BN57 136 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 BCKDKO14874 412 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 DENRO43583 198 aaKnown RBP8.76□□□□□ -1.01
SF3A1-207ENST00000471342 EIF1BO60739 113 aaKnown RBP8.76□□□□□ -1.01
SF3A1-207ENST00000471342 SLC19A2O60779 497 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 TRMUO75648 421 aaKnown RBP8.76□□□□□ -1.01
SF3A1-207ENST00000471342 RCBTB2O95199 551 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 PGA4P0DJD7 388 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 PGA3P0DJD8 388 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 CLUP10909 449 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 IFNA8P32881 189 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 IFNGR2P38484 337 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 CTXN1P60606 82 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 CD47Q08722 323 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 PMS2P3Q13401 168 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 MELKQ14680 651 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 MFSD13AQ14CX5 517 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 ETFDHQ16134 617 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 SNCBQ16143 134 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 IGFBP7Q16270 282 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 ALG10Q5BKT4 473 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 CLEC12AQ5QGZ9 265 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 TMEM201Q5SNT2 666 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 SLC25A30Q5SVS4 291 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF691Q5VV52 312 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 C3P1Q6ZMU1 363 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 FCRLAQ7L513 359 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 CD163Q86VB7 1156 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 TUSC5Q8IXB3 177 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 ENTHD1Q8IYW4 607 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 ARIH2OSQ8N7S6 290 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 SLC37A3Q8NCC5 494 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 FANK1Q8TC84 345 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 TMEM54Q969K7 222 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 TMEM45BQ96B21 275 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF775Q96BV0 537 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-207ENST00000471342 RASD2Q96D21 266 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 SIGLEC11Q96RL6 698 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF649Q9BS31 505 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 TTYH2Q9BSA4 534 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 EMC6Q9BV81 110 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 ANKRD60Q9BZ19 345 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 HINT3Q9NQE9 182 aaKnown RBP8.76□□□□□ -1.01
SF3A1-207ENST00000471342 CMC2Q9NRP2 79 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 VSX1Q9NZR4 365 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-207ENST00000471342 CAMK2AQ9UQM7 478 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 RNF6Q9Y252 685 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 RASD1Q9Y272 281 aa8.76□□□□□ -1.01
SF3A1-207ENST00000471342 A0A0G2JNJ9 132 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 TEX13CA0A0J9YWL9 993 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 SLC22A23A1A5C7 686 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 GJE1A6NN92 205 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 B8ZZF3 427 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 C11orf98E9PRG8 122 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 J3QRE1 110 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 UPK3AO75631 287 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 ADORA3P0DMS8 318 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 SAGP10523 405 aaPredicted RBP8.75□□□□□ -1.01
SF3A1-207ENST00000471342 IFNGR1P15260 489 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 MYF6P23409 242 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 GRK5P34947 590 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 TIMP3P35625 211 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 CAPGP40121 348 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 CA7P43166 264 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 SLC15A1P46059 708 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 UQCRFS1P47985 274 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 SELENOPP49908 381 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 RPS6KA3P51812 740 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 PRPS1P60891 318 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 RPL27P61353 136 aaKnown RBP8.75□□□□□ -1.01
SF3A1-207ENST00000471342 CSNK2A1P68400 391 aaPredicted RBP8.75□□□□□ -1.01
SF3A1-207ENST00000471342 ADORA2A-AS1P86434 159 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 KEAP1Q14145 624 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 SMN1Q16637 294 aaKnown RBP8.75□□□□□ -1.01
SF3A1-207ENST00000471342 SLC35F1Q5T1Q4 408 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 GFRALQ6UXV0 394 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 FOXL2NBQ6ZUU3 175 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 PM20D2Q8IYS1 436 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 OR6V1Q8N148 313 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 SLC43A2Q8N370 569 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 FAM26EQ8N5C1 309 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 MEIOBQ8N635 442 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 BBS1Q8NFJ9 593 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 OR6X1Q8NH79 312 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 SGCDQ92629 289 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 STARD4Q96DR4 205 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 TSSK2Q96PF2 358 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 RHNO1Q9BSD3 238 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 TAPBPLQ9BX59 468 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 ASPNQ9BXN1 380 aa8.75□□□□□ -1.01
SF3A1-207ENST00000471342 POLDIP3Q9BY77 421 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms