RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 MS4A18Q3C1V0 323 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 KLHL36Q8N4N3 616 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 OR6K6Q8NGW6 343 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 OR14L1PQ8NHC6 308 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 SMPDL3BQ92485 455 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 DTNBP1Q96EV8 351 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 OPALINQ96PE5 141 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 TBX5Q99593 518 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 BCL7BQ9BQE9 202 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 ZFP64Q9NPA5 681 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 DAPL1A0PJW8 107 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 CCRL2O00421 344 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 IGHMP01871 453 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 SCG5P05408 212 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 DOC2BQ14184 412 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 CTF1Q16619 201 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 RSPO4Q2I0M5 234 aaPredicted RBP17.05■□□□□ 0.32
SMC4-209ENST00000468653 ADCK1Q86TW2 530 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 GATAD2BQ8WXI9 593 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 DCUN1D5Q9BTE7 237 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 SRA1Q9HD15 236 aaKnown RBP17.05■□□□□ 0.32
SMC4-209ENST00000468653 INPP5EQ9NRR6 644 aa17.05■□□□□ 0.32
SMC4-209ENST00000468653 MED13Q9UHV7 2174 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 A0A1W2PPW3 197 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 DCDC2BA2VCK2 349 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 PINLYPA6NC86 204 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 NPIPA5E9PKD4 350 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 SULT2B1O00204 365 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 TRAPPC6AO75865 159 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 GLCEO94923 617 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 RFPL3SP0C7P2 107 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 HLA-DOBP13765 273 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 PYCR1P32322 319 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 SOX8P57073 446 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 LSM3P62310 102 aaKnown RBP17.04■□□□□ 0.32
SMC4-209ENST00000468653 MLLT11Q13015 90 aaPredicted RBP17.04■□□□□ 0.32
SMC4-209ENST00000468653 CLN3Q13286 438 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 TMPRSS11AQ6ZMR5 421 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 YRDCQ86U90 279 aaKnown RBP17.04■□□□□ 0.32
SMC4-209ENST00000468653 POMGNT2Q8NAT1 580 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 OR2M7Q8NG81 312 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 OR2T4Q8NH00 348 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 ZNF519Q8TB69 540 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 TSSK2Q96PF2 358 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 CNN2Q99439 309 aaKnown RBP17.04■□□□□ 0.32
SMC4-209ENST00000468653 NPIPA1Q9UND3 350 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 MOKQ9UQ07 419 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 TRAPPC4Q9Y296 219 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 CNTRLQ7Z7A1 2325 aa17.04■□□□□ 0.32
SMC4-209ENST00000468653 FAM171A2A8MVW0 826 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 CDK2AP1O14519 115 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 AIREO43918 545 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 FZD7O75084 574 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 WT1P19544 449 aaPredicted RBP17.03■□□□□ 0.32
SMC4-209ENST00000468653 GADD45AP24522 165 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 GDF1P27539 372 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 DAP3P51398 398 aaKnown RBP17.03■□□□□ 0.32
SMC4-209ENST00000468653 ACTC1P68032 377 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 ACTA1P68133 377 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 SLC35A1P78382 337 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 GGTLC2Q14390 218 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 MELKQ14680 651 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 TBC1D25Q3MII6 688 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 TMPPEQ6ZT21 453 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 OR52N1Q8NH53 320 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 ZNRF4Q8WWF5 429 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 MIB2Q96AX9 1013 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 ZNF649Q9BS31 505 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 ALG12Q9BV10 488 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 SYT4Q9H2B2 425 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 POLHQ9Y253 713 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 CAB39Q9Y376 341 aaPredicted RBP17.03■□□□□ 0.32
SMC4-209ENST00000468653 PCDHGB7Q9Y5F8 929 aa17.03■□□□□ 0.32
SMC4-209ENST00000468653 OR5H15A6NDH6 313 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 BCL10O95999 233 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 IFNGR1P15260 489 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 CD79BP40259 229 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 RAC1P63000 192 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 HSF1Q00613 529 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 POU3F1Q03052 451 aaPredicted RBP17.02■□□□□ 0.32
SMC4-209ENST00000468653 FOXO1Q12778 655 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 NFATC3Q12968 1075 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 PXKQ7Z7A4 578 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 PM20D2Q8IYS1 436 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 EXD3Q8N9H8 876 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 ADPRHL1Q8NDY3 354 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 FAM83FQ8NEG4 500 aaPredicted RBP17.02■□□□□ 0.32
SMC4-209ENST00000468653 RPL3LQ92901 407 aaKnown RBP17.02■□□□□ 0.32
SMC4-209ENST00000468653 SNX18Q96RF0 628 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 ALG8Q9BVK2 526 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 HES7Q9BYE0 225 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 RERGLQ9H628 205 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 ISYNA1Q9NPH2 558 aa17.02■□□□□ 0.32
SMC4-209ENST00000468653 PRSS37A4D1T9 235 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 TRIM64BA6NI03 449 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 A6NIZ1 184 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 GJE1A6NN92 205 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 ZNF891A8MT65 544 aaPredicted RBP17.02■□□□□ 0.31
SMC4-209ENST00000468653 SLC22A1O15245 554 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 PMS2P2O95744 297 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms