RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ANXA8P13928 327 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 FMO3P31513 532 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 PCBP3P57721 371 aaKnown RBP12.87□□□□□ -0.35
COL27A1-203ENST00000468565 CSNK2BP67870 215 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 SPIBQ01892 262 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 MAD2L1BPQ15013 274 aaPredicted RBP12.87□□□□□ -0.35
COL27A1-203ENST00000468565 ZSWIM7Q19AV6 140 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 MRPL2Q5T653 305 aaKnown RBP12.87□□□□□ -0.35
COL27A1-203ENST00000468565 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 REEP3Q6NUK4 255 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 BEND4Q6ZU67 534 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF440Q8IYI8 595 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 OR52P1PQ8NH57 321 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 SGCDQ92629 289 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 NRGNQ92686 78 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 OR5B2Q96R09 309 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 NAA50Q9GZZ1 169 aaKnown RBP12.87□□□□□ -0.35
COL27A1-203ENST00000468565 CTPS2Q9NRF8 586 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 WARS2Q9UGM6 360 aaKnown RBP12.87□□□□□ -0.35
COL27A1-203ENST00000468565 EDARQ9UNE0 448 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 FAM32AQ9Y421 112 aaKnown RBP12.87□□□□□ -0.35
COL27A1-203ENST00000468565 PCDHGB1Q9Y5G3 927 aa12.87□□□□□ -0.35
COL27A1-203ENST00000468565 A0A0G2JPF8 293 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 POM121CA8CG34 1229 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF99A8MXY4 864 aaPredicted RBP12.86□□□□□ -0.35
COL27A1-203ENST00000468565 HNRNPCL2B2RXH8 293 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 HNRNPCL3B7ZW38 293 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 FAM20BO75063 409 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 THBS1P07996 1170 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 HNRNPCL4P0DMR1 293 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 ENPP1P22413 925 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 IDH2P48735 452 aaKnown RBP12.86□□□□□ -0.35
COL27A1-203ENST00000468565 CLK1P49759 484 aaKnown RBP12.86□□□□□ -0.35
COL27A1-203ENST00000468565 CSNK2A1P68400 391 aaPredicted RBP12.86□□□□□ -0.35
COL27A1-203ENST00000468565 GUCA2AQ02747 115 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 TESK1Q15569 626 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 TMPPEQ6ZT21 453 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 TSEN54Q7Z6J9 526 aaKnown RBP12.86□□□□□ -0.35
COL27A1-203ENST00000468565 SVOPQ8N4V2 548 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 OR10G2Q8NGC3 310 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 TMEM19Q96HH6 336 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 WFIKKN1Q96NZ8 548 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 BCO1Q9HAY6 547 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 A4GALTQ9NPC4 353 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 PAK1IP1Q9NWT1 392 aaPredicted RBP12.86□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF226Q9NYT6 803 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 KLHL9Q9P2J3 617 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 POFUT2Q9Y2G5 429 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 A0A1W2PPW3 197 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 CDHR4A6H8M9 788 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 AP3D1O14617 1153 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 SMAD9O15198 467 aaKnown RBP12.86□□□□□ -0.35
COL27A1-203ENST00000468565 XPNPEP2O43895 674 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 CYTIPO60759 359 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 PPP3CBP16298 524 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 DIO1P49895 249 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 PSMD7P51665 324 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 CDH12P55289 794 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 PIGFQ07326 219 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF836Q6ZNA1 936 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 ADGRG3Q86Y34 549 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 TUSC5Q8IXB3 177 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 OR4C15Q8NGM1 316 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 IPCEF1Q8WWN9 437 aaPredicted RBP12.86□□□□□ -0.35
COL27A1-203ENST00000468565 HRASLS5Q96KN8 279 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 PIP5K1AQ99755 562 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 PSD2Q9BQI7 771 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 MED18Q9BUE0 208 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 OR10A4Q9H209 315 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 DUSP21Q9H596 190 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 BCL2L10Q9HD36 194 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 KLHL28Q9NXS3 571 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 ST6GALNAC2Q9UJ37 374 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 HDGFL3Q9Y3E1 203 aa12.86□□□□□ -0.35
COL27A1-203ENST00000468565 E9PQ18 207 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 SULT2B1O00204 365 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 DNPH1O43598 174 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 YES1P07947 543 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 TNFRSF1BP20333 461 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 PCMT1P22061 227 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 SLC1A3P43003 542 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 OR1E2P47887 323 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 POLR2HP52434 150 aaKnown RBP12.85□□□□□ -0.35
COL27A1-203ENST00000468565 MAP2K6P52564 334 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 LARS2Q15031 903 aaKnown RBP12.85□□□□□ -0.35
COL27A1-203ENST00000468565 NPTX1Q15818 432 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 MICAQ29983 383 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 EXOC3L2Q2M3D2 409 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 RPS26P11Q5JNZ5 115 aaPredicted RBP12.85□□□□□ -0.35
COL27A1-203ENST00000468565 DMRTA1Q5VZB9 504 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 VRK2Q86Y07 508 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 CROCCP3Q8IVE0 287 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 RORBQ92753 470 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 FEVQ99581 238 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 DGCR6LQ9BY27 220 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 C12orf49Q9H741 205 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 ZNF556Q9HAH1 456 aa12.85□□□□□ -0.35
COL27A1-203ENST00000468565 CACYBPQ9HB71 228 aaKnown RBP12.85□□□□□ -0.35
COL27A1-203ENST00000468565 PLGRKTQ9HBL7 147 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms