RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 CLDN18P56856 261 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 CLDN20P56880 219 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 RBM11P57052 281 aaKnown RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 FOXL2P58012 376 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 OR12D2P58182 307 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 TAS2R43P59537 309 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 TAS2R30P59541 319 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ERVFC1-1P60608 527 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ZP1P60852 638 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 CDC42P60953 191 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 RAB8AP61006 207 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 UBE2MP61081 183 aaKnown RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 RPS16P62249 146 aaKnown RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 RANP62826 216 aaKnown RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 GNG3P63215 75 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 PAFAH1B2P68402 229 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 CSNK1G2P78368 415 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 IL13RA1P78552 427 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 LCN2P80188 198 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 SSBP2P81877 361 aaPredicted RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 SLC7A9P82251 487 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 PRR5P85299 388 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 MS4A2Q01362 244 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 PAX2Q02962 417 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 EMX1Q04741 257 aaPredicted RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 PRKCDQ05655 676 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 SRSF1Q07955 248 aaKnown RBP eCLIP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ZNF415Q09FC8 603 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ABHD18Q0P651 414 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ST3GAL3Q11203 375 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 HYAL1Q12794 435 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 AIMP2Q13155 320 aaKnown RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 UBE2V1Q13404 147 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 OLIG2Q13516 323 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 OR2F1Q13607 317 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 CDH18Q13634 790 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 RAB32Q13637 225 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 TPBGQ13641 420 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 CEACAM7Q14002 265 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 IL11RAQ14626 422 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 TTLL4Q14679 1199 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 MEF2DQ14814 521 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 HERPUD1Q15011 391 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ABRAXAS2Q15018 415 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 PTGES3Q15185 160 aaKnown RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 TGIF1Q15583 401 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 INPP5JQ15735 1006 aaPredicted RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 GABRA6Q16445 453 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 SNRNP35Q16560 246 aaKnown RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ACKR1Q16570 336 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 RBBP7Q16576 425 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 CTF1Q16619 201 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 SMN1Q16637 294 aaKnown RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 CCL15Q16663 113 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 HIF1AQ16665 826 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 IQCJQ1A5X6 159 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 PRSS53Q2L4Q9 553 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 TCTN1Q2MV58 587 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 DPY19L1Q2PZI1 675 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 PRTGQ2VWP7 1150 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 DEFB115Q30KQ5 88 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ZNF699Q32M78 642 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 C18orf21Q32NC0 220 aaPredicted RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 BSXQ3C1V8 233 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 SNAI3Q3KNW1 292 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ANKRD55Q3KP44 614 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 CEACAM21Q3KPI0 293 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ITPRIPL2Q3MIP1 535 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 C3orf36Q3SXR2 165 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ELOA3BQ3SY89 546 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 TIMM50Q3ZCQ8 353 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 LGALSLQ3ZCW2 172 aaPredicted RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 CCSMST1Q4G0I0 132 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 SYTL3Q4VX76 610 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ATP6AP1LQ52LC2 224 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 UNC50Q53HI1 259 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 OCIAD2Q56VL3 154 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 TMEM41BQ5BJD5 291 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 RNASE12Q5GAN4 147 aaKnown RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 XKR7Q5GH72 579 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ZNF766Q5HY98 468 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 NHLRC3Q5JS37 347 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 RAB41Q5JT25 222 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 NKAPLQ5M9Q1 402 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 CTSL3PQ5NE16 218 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 FFAR4Q5NUL3 377 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 COX20Q5RI15 118 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 PRR31Q5SQ13 230 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 DNLZQ5SXM8 178 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 SPATA46Q5T0L3 261 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 OTUD3Q5T2D3 398 aaPredicted RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 IDNKQ5T6J7 187 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 PHF19Q5T6S3 580 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 FAM102AQ5T9C2 384 aaPredicted RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 N4BP2L1Q5TBK1 243 aaPredicted RBP0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 ZNF697Q5TEC3 545 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 FAM78BQ5VT40 261 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 C1orf189Q5VU69 101 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 DCAF12L2Q5VW00 463 aa0.83□□□□□ -2.28
RPL39P28-201ENST00000465655 LYPLAL1Q5VWZ2 237 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms