RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 AIFM1O95831 613 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 LGI1O95970 557 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TNFP01375 233 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 STATHP02808 62 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 HMGN2P05204 90 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 RPLP0P05388 317 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 STSP08842 583 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 C8orf89P0DMQ9 161 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 F3P13726 295 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 GSTM3P21266 225 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 HNRNPA2B1P22626 353 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CPN2P22792 545 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ELAVL4P26378 380 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 AK4P27144 223 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 AKT2P31751 481 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 IFNA8P32881 189 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 UGT2B10P36537 528 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TGFBR2P37173 567 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 IFNGR2P38484 337 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 FEN1P39748 380 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ACTR1BP42025 376 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 GSSP48637 474 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 GPR143P51810 404 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 XKP51811 444 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ERVFC1-1P60608 527 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 RAB8AP61006 207 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 SRP54P61011 504 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ACTR1AP61163 376 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 VBP1P61758 197 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 NCS1P62166 190 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 RPS15AP62244 130 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 SNRPGP62308 76 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 LSM3P62310 102 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TUBA1BP68363 451 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 MRPS34P82930 218 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 SPOCK1Q08629 439 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ST3GAL4Q11206 333 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ITGADQ13349 1161 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 HTR4Q13639 388 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 NR1D2Q14995 579 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 NCF4Q15080 339 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CEBPEQ15744 281 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 SYPL1Q16563 259 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 NDUFA9Q16795 377 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 GPAT3Q53EU6 434 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ARMCX4Q5H9R4 360 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF311Q5JNZ3 666 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 EOGTQ5NDL2 527 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 MEDAGQ5VYS4 303 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMEM236Q5W0B7 351 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 C18orf63Q68DL7 685 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMEM71Q6P5X7 295 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 PET117Q6UWS5 81 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CASP12Q6UXS9 341 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TUBA1AQ71U36 451 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 HAPLN4Q86UW8 402 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TRIM69Q86WT6 500 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 RBM45Q8IUH3 476 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 LURAP1LQ8IV03 231 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 LACC1Q8IV20 430 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMCO5AQ8N6Q1 288 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CAMKVQ8NCB2 501 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CLEC18CQ8NCF0 446 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR4D11Q8NGI4 311 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR5D16Q8NGK9 328 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR10S1Q8NGN2 331 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR6Q1Q8NGQ2 317 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 MOSPD2Q8NHP6 518 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 VANGL1Q8TAA9 524 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 NDNFQ8TB73 568 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF675Q8TD23 568 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 GNPDA2Q8TDQ7 276 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ADAMTS14Q8WXS8 1223 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ABTB1Q969K4 478 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TSACCQ96A04 125 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMEM18Q96B42 140 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 PPP1R14BQ96C90 147 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 RNF183Q96D59 192 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TM4SF19Q96DZ7 209 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZHX1-C8orf76Q96EF9 292 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ARSGQ96EG1 525 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CNRIP1Q96F85 164 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 C16orf58Q96GQ5 468 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZC3HAV1LQ96H79 300 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMEM80Q96HE8 168 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TXNDC15Q96J42 360 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 BMFQ96LC9 184 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 NECTIN4Q96NY8 510 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TRNT1Q96Q11 434 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 RHNO1Q9BSD3 238 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 FNDC11Q9BVV2 318 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 C1QTNF4Q9BXJ3 329 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CDCA4Q9BXL8 241 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 PINK1Q9BXM7 581 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 POLR2J3Q9H1A7 115 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 FGF22Q9HCT0 170 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 HMG20AQ9NP66 347 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 AMBNQ9NP70 447 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 TRPV5Q9NQA5 729 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 FAIMQ9NVQ4 179 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms