RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 CTHRC1Q96CG8 243 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 MAP3K3Q99759 626 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 OR51J1Q9H342 316 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 ANKRD10Q9NXR5 420 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 IER3IP1Q9Y5U9 82 aa11.88□□□□□ -0.51
COL12A1-205ENST00000425443 ASCC3Q8N3C0 2202 aaKnown RBP11.87□□□□□ -0.51
COL12A1-205ENST00000425443 A0A0B4J2E0 115 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 A0A1B0GX12 115 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 CSTAP01040 98 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 PTHLHP12272 177 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 HIST1H1CP16403 213 aaKnown RBP11.87□□□□□ -0.51
COL12A1-205ENST00000425443 STOMP27105 288 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 GSG1Q2KHT4 349 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 LGALSLQ3ZCW2 172 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-205ENST00000425443 LRFN4Q6PJG9 635 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 ZNF550Q7Z398 422 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 GPALPP1Q8IXQ4 340 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 CHMP1AQ9HD42 196 aaPredicted RBP11.87□□□□□ -0.51
COL12A1-205ENST00000425443 GSN-AS1Q9NRJ2 163 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 CBY1Q9Y3M2 126 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 MPDZO75970 2070 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 CCDC85CA6NKD9 419 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 C2CD4DB7Z1M9 353 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 SLC22A5O76082 557 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 ZNF806P0C7X5 589 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 MAOAP21397 527 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 PTAFRP25105 342 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 RPS11P62280 158 aaKnown RBP eCLIP11.87□□□□□ -0.51
COL12A1-205ENST00000425443 ULK3Q6PHR2 472 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 TOMM5Q8N4H5 51 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 RCBTB1Q8NDN9 531 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 DERL3Q96Q80 235 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 NMNAT3Q96T66 252 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 HEATR5AQ86XA9 2040 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 EML5Q05BV3 1969 aa11.87□□□□□ -0.51
COL12A1-205ENST00000425443 ACOD1A6NK06 481 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 CFDP00746 253 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-205ENST00000425443 RAB3BP20337 219 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 SELENOPP49908 381 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 BICRALQ6AI39 1079 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 SLC16A13Q7RTY0 426 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-205ENST00000425443 LMX1AQ8TE12 382 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 WDR89Q96FK6 387 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-205ENST00000425443 ZNF578Q96N58 590 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-205ENST00000425443 GFI1Q99684 422 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 G6PC3Q9BUM1 346 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 DPAGT1Q9H3H5 408 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 DNAJB12Q9NXW2 375 aaKnown RBP11.86□□□□□ -0.51
COL12A1-205ENST00000425443 BAIAP2Q9UQB8 552 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 SELENOFO60613 162 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 PRAMEF2O60811 474 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 CTNSO60931 367 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 IGKV1D-16P01601 117 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 EPXP11678 715 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 LTBRP36941 435 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 RPS27P42677 84 aaKnown RBP11.86□□□□□ -0.51
COL12A1-205ENST00000425443 HOXA1P49639 335 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-205ENST00000425443 CCR5P51681 352 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 SFRP4Q6FHJ7 346 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-205ENST00000425443 ZPLD1Q8TCW7 415 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 ADAMTS14Q8WXS8 1223 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 TSSK2Q96PF2 358 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 DPCDQ9BVM2 203 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-205ENST00000425443 CACNG6Q9BXT2 260 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 LRIT1Q9P2V4 623 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 CABIN1Q9Y6J0 2220 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 TRBV2A0A0J9YWF9 115 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 PMS2P1A4D2B8 440 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 MCIDASD6RGH6 385 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 BLOC1S5-TXNDC5H3BN57 136 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 ZNF593O00488 134 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-205ENST00000425443 GPR171O14626 319 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 SRPX2O60687 465 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-205ENST00000425443 RAB3AP20336 220 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 IGFBP4P22692 258 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 EDNRAP25101 427 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 CAMK2DQ13557 499 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 ZNF273Q14593 569 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 AKIRIN2Q53H80 203 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 OR7E24Q6IFN5 339 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 KCTD12Q96CX2 325 aaKnown RBP11.86□□□□□ -0.51
COL12A1-205ENST00000425443 SGTBQ96EQ0 304 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 TGM7Q96PF1 710 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 LRRC61Q9BV99 259 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 INPP5EQ9NRR6 644 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 B3GNT2Q9NY97 397 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 SLCO1B1Q9Y6L6 691 aa11.86□□□□□ -0.51
COL12A1-205ENST00000425443 WDFY3Q8IZQ1 3526 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 TO15178 435 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 NDUFB2O95178 105 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 DHFRP00374 187 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 MAP3K8P41279 467 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 TAS2R43P59537 309 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 ERVK-25P63136 954 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 FGFBP1Q14512 234 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 KIRREL2Q6UWL6 708 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 SMRP1Q8NCR6 262 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 TSTD1Q8NFU3 115 aa11.85□□□□□ -0.51
COL12A1-205ENST00000425443 RASD2Q96D21 266 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms