RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 KRCC1Q9NPI7 259 aaPredicted RBP18.21■□□□□ 0.51
HMGXB4-203ENST00000420166 ASB6Q9NWX5 421 aa18.21■□□□□ 0.51
HMGXB4-203ENST00000420166 MED29Q9NX70 200 aa18.21■□□□□ 0.51
HMGXB4-203ENST00000420166 UPB1Q9UBR1 384 aa18.21■□□□□ 0.51
HMGXB4-203ENST00000420166 NDRG3Q9UGV2 375 aa18.21■□□□□ 0.51
HMGXB4-203ENST00000420166 TMCC3Q9ULS5 477 aa18.21■□□□□ 0.51
HMGXB4-203ENST00000420166 HIF3AQ9Y2N7 669 aa18.21■□□□□ 0.51
HMGXB4-203ENST00000420166 LYVE1Q9Y5Y7 322 aa18.21■□□□□ 0.51
HMGXB4-203ENST00000420166 CELSR2Q9HCU4 2923 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 CACNA1DQ01668 2161 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 CDC42EP2O14613 210 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 SLC43A1O75387 559 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 LYZL6O75951 148 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 IFNGR1P15260 489 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 OMPP47874 163 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 SLC9A3P48764 834 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 HMGA2P52926 109 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 LGALS3BPQ08380 585 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 TSC22D1Q15714 1073 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 C1orf146Q5VVC0 180 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 ANKRD34AQ69YU3 496 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 SLC35D2Q76EJ3 337 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 OAFQ86UD1 273 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 TMEM123Q8N131 208 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 ZNF433Q8N7K0 673 aaPredicted RBP18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 MOSPD2Q8NHP6 518 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 UTP4Q969X6 686 aaKnown RBP18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 DACH2Q96NX9 599 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 EMC6Q9BV81 110 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 LINC00470Q9BZP3 86 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 ACTR6Q9GZN1 396 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 INIPQ9NRY2 104 aa18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 SETXQ7Z333 2677 aaKnown RBP18.2■□□□□ 0.5
HMGXB4-203ENST00000420166 TRAV27A0A087WT01 109 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 SLC35F4A4IF30 521 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 PDLIM1O00151 329 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 TNFRSF11BO00300 401 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 CIB2O75838 187 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 F13BP05160 661 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 PPP3CBP16298 524 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 IL32P24001 234 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 FOXG1P55316 489 aaPredicted RBP18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 BIDP55957 195 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 FHL1Q13642 323 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 LAPTM4AQ15012 233 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 ANKDD1AQ495B1 522 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 BHLHA15Q7RTS1 189 aaPredicted RBP18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 ABHD12BQ7Z5M8 362 aaPredicted RBP18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 ZNF295-AS1Q8N0V1 137 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 OR4C15Q8NGM1 316 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 OR51A7Q8NH64 312 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 RSRC1Q96IZ7 334 aaKnown RBP18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 WFIKKN1Q96NZ8 548 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 ALKBH3Q96Q83 286 aaPredicted RBP18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 MED18Q9BUE0 208 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 VNN3Q9NY84 501 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 TAS2R16Q9NYV7 291 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 ABCA4P78363 2273 aa18.19■□□□□ 0.5
HMGXB4-203ENST00000420166 A0A1W2PRG6 482 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 CLOCKO15516 846 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 KLF4O43474 513 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 UPK3AO75631 287 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 KRT33AO76009 404 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 ITGA5P08648 1049 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 EPXP11678 715 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 DNAJA1P31689 397 aaKnown RBP18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 CARD17Q5XLA6 110 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 WDFY1Q8IWB7 410 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 PAPD5Q8NDF8 572 aaKnown RBP18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 OR6X1Q8NH79 312 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 S100PBPQ96BU1 408 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 ADAD1Q96M93 576 aaKnown RBP18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 TNFRSF13CQ96RJ3 184 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 REEP1Q9H902 201 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 MCCC2Q9HCC0 563 aa18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 CCM2LQ9NUG4 571 aaPredicted RBP18.18■□□□□ 0.5
HMGXB4-203ENST00000420166 ZNF726A6NNF4 738 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 ZNF587BE7ETH6 402 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 OR10H3O60404 316 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 FKBP6O75344 327 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 CST1P01037 141 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 MPGP29372 298 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 MELKQ14680 651 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 ZBED5Q49AG3 693 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 ALG10Q5BKT4 473 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 C9orf135Q5VTT2 229 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 C22orf34Q6ZV56 151 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 LINGO2Q7L985 606 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 ZER1Q7Z7L7 766 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 C20orf196Q8IYI0 205 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 GPR137CQ8N3F9 429 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 LRRC75AQ8NAA5 344 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 SLCO4A1Q96BD0 722 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 C14orf79Q96F83 325 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 LRR1Q96L50 414 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 GPA33Q99795 319 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 USB1Q9BQ65 265 aaKnown RBP18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 YY1AP1Q9H869 796 aa18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 SAMHD1Q9Y3Z3 626 aaKnown RBP18.17■□□□□ 0.5
HMGXB4-203ENST00000420166 DCHS2Q6V1P9 2916 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms