RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 RNF13O43567 381 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 CLDN1O95832 211 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 GSTM3P21266 225 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 CBLP22681 906 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 CD79BP40259 229 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 GPR4P46093 362 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 DAP3P51398 398 aaKnown RBP10.54□□□□□ -0.72
ATG4B-207ENST00000415107 FXYD6P3P58550 94 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 COX10Q12887 443 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 C1DQ13901 141 aaKnown RBP10.54□□□□□ -0.72
ATG4B-207ENST00000415107 ALG10Q5BKT4 473 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 SHQ1Q6PI26 577 aaKnown RBP10.54□□□□□ -0.72
ATG4B-207ENST00000415107 CASP12Q6UXS9 341 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 AAED1Q7RTV5 226 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 KIF18BQ86Y91 864 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 KDM8Q8N371 416 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 ZNF610Q8N9Z0 462 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 GNPDA2Q8TDQ7 276 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 OR2M2Q96R28 347 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 GPA33Q99795 319 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 RBM24Q9BX46 236 aaKnown RBP10.54□□□□□ -0.72
ATG4B-207ENST00000415107 UCK2Q9BZX2 261 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 SLCO5A1Q9H2Y9 848 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 TXNIPQ9H3M7 391 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 MCCC2Q9HCC0 563 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 NPDC1Q9NQX5 325 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-207ENST00000415107 INIPQ9NRY2 104 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 GALNT8Q9NY28 637 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 IL20Q9NYY1 176 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 ADGRG4Q8IZF6 3080 aa10.54□□□□□ -0.72
ATG4B-207ENST00000415107 TRAV27A0A087WT01 109 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 A0A1W2PRG6 482 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 NKX2-6A6NCS4 301 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 BLOC1S5-TXNDC5H3BN57 136 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 H3BNX3 289 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 GNGT2O14610 69 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 ARPC3O15145 178 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 TIPRLO75663 272 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 SMNDC1O75940 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
ATG4B-207ENST00000415107 NDUFB2O95178 105 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 CD14P08571 375 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 NR2C1P13056 603 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 HLA-DOBP13765 273 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 AHCYP23526 432 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 EDNRAP25101 427 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 AQP2P41181 271 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 SELENOPP49908 381 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 ARHGDIAP52565 204 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 ZNF133P52736 654 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-207ENST00000415107 CLDN17P56750 224 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 HIST3H3Q16695 136 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 ARMC4Q5T2S8 1044 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 ZNF620Q6ZNG0 422 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 RASSF6Q6ZTQ3 369 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 SLC35D2Q76EJ3 337 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 ZNF627Q7L945 461 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 FAM122BQ7Z309 247 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 ABHD12BQ7Z5M8 362 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-207ENST00000415107 ZNF100Q8IYN0 542 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 SVOPLQ8N434 492 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 AQP11Q8NBQ7 271 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 C1orf162Q8NEQ5 155 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-207ENST00000415107 OR10G2Q8NGC3 310 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 OR9Q2Q8NGE9 314 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 OR13C2Q8NGS9 318 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 FNDC8Q8TC99 324 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 GIPC3Q8TF64 312 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 ASB10Q8WXI3 467 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 CENPNQ96H22 339 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-207ENST00000415107 SLC25A44Q96H78 314 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-207ENST00000415107 TNFRSF13CQ96RJ3 184 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 SPOCK3Q9BQ16 436 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 HDHD5Q9BXW7 423 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 MRPL13Q9BYD1 178 aaKnown RBP10.53□□□□□ -0.72
ATG4B-207ENST00000415107 GABARAPL1Q9H0R8 117 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 OPN3Q9H1Y3 402 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-207ENST00000415107 NRIP3Q9NQ35 241 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 GPR52Q9Y2T5 361 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 U3KQV3 271 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 PTPN13Q12923 2485 aa10.53□□□□□ -0.72
ATG4B-207ENST00000415107 ANKHD1Q8IWZ3 2542 aaKnown RBP10.52□□□□□ -0.72
ATG4B-207ENST00000415107 SLC35F4A4IF30 521 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 UNC119BA6NIH7 251 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 C11orf98E9PRG8 122 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 IMPA2O14732 288 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 AHCYL1O43865 530 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 SLC43A1O75387 559 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 GOSR1O95249 250 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 TXNDC12O95881 172 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 BCL10O95999 233 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 GASTP01350 101 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 PGA4P0DJD7 388 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 PGA3P0DJD8 388 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 ANXA8P13928 327 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 POU2F1P14859 743 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 IFNGR1P15260 489 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 PPP3CBP16298 524 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 ZNF26P17031 533 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-207ENST00000415107 CCKARP32238 428 aa10.52□□□□□ -0.73
ATG4B-207ENST00000415107 SH3BGRP55822 239 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms