RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CPNE4Q96A23 557 aaPredicted RBP12.72□□□□□ -0.37
VAPA-202ENST00000400000 IL37Q9NZH6 218 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 ANKRD61A6NGH8 418 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 PRKACAP17612 351 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 PROX2Q3B8N5 592 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 METAP1DQ6UB28 335 aaPredicted RBP12.72□□□□□ -0.37
VAPA-202ENST00000400000 ZNF587Q96SQ5 575 aaPredicted RBP12.72□□□□□ -0.37
VAPA-202ENST00000400000 C20orf24Q9BUV8 137 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 CCDC32Q9BV29 185 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 SIGLEC1Q9BZZ2 1709 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 NUDT1P36639 197 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 P2RX3P56373 397 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 OR5M9Q8NGP3 310 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 SLC38A5Q8WUX1 472 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 ACOT11Q8WXI4 607 aaPredicted RBP12.72□□□□□ -0.37
VAPA-202ENST00000400000 EMC7Q9NPA0 242 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 MYH7BA7E2Y1 1941 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 A0A1B0GTW7 788 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 FAM221AA4D161 298 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 OR2W5A6NFC9 320 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 SERINC4A6NH21 518 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 PLA1AQ53H76 456 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 RAB41Q5JT25 222 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 DCXRQ7Z4W1 244 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 ZNF546Q86UE3 836 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 ZC3H3Q8IXZ2 948 aaKnown RBP12.72□□□□□ -0.37
VAPA-202ENST00000400000 ANKRD9Q96BM1 317 aaPredicted RBP12.72□□□□□ -0.37
VAPA-202ENST00000400000 FZR1Q9UM11 496 aa12.72□□□□□ -0.37
VAPA-202ENST00000400000 A0A1W2PNR3 127 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 FOXE1O00358 373 aaPredicted RBP12.71□□□□□ -0.37
VAPA-202ENST00000400000 SOX15O60248 233 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 TPT1P13693 172 aaKnown RBP12.71□□□□□ -0.37
VAPA-202ENST00000400000 GDPD3Q7L5L3 318 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 KHSRPQ92945 711 aaKnown RBP eCLIP12.71□□□□□ -0.371e-7■■■□□ 17.6
VAPA-202ENST00000400000 ZNF281Q9Y2X9 895 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 RPS10-NUDT3A0A1W2PQS6 291 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 FOSL1P15407 271 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 RPS10P46783 165 aaKnown RBP12.71□□□□□ -0.37
VAPA-202ENST00000400000 CYB561P49447 251 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 SPCS2Q15005 226 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 TBC1D28Q2M2D7 210 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 FAM71CQ8NEG0 241 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 NRG4Q8WWG1 115 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 CLMPQ9H6B4 373 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 OR6C65A6NJZ3 312 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 IMPA1P29218 277 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 SLC7A9P82251 487 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 HACD4Q5VWC8 232 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 RDH10Q8IZV5 341 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 ZFAND1Q8TCF1 268 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 SDR39U1Q9NRG7 319 aaPredicted RBP12.71□□□□□ -0.37
VAPA-202ENST00000400000 GPR45Q9Y5Y3 372 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 NKX6-3A6NJ46 265 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 GALR3O60755 368 aaPredicted RBP12.71□□□□□ -0.37
VAPA-202ENST00000400000 POLR2IP36954 125 aaKnown RBP12.71□□□□□ -0.37
VAPA-202ENST00000400000 EMX1Q04741 257 aaPredicted RBP12.71□□□□□ -0.37
VAPA-202ENST00000400000 MFAP5Q13361 173 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 OR51H1Q8NH63 302 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 LGALS14Q8TCE9 139 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 PLPPR2Q96GM1 343 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 PRRT1Q99946 306 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 PIGQQ9BRB3 760 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 NAA50Q9GZZ1 169 aaKnown RBP12.71□□□□□ -0.37
VAPA-202ENST00000400000 MKS1Q9NXB0 559 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 EMCNQ9ULC0 261 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 MYH4Q9Y623 1939 aa12.71□□□□□ -0.37
VAPA-202ENST00000400000 TNFSF11O14788 317 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 HCRTR1O43613 425 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 ICAM2P13598 275 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 EXOSC2Q13868 293 aaKnown RBP12.71□□□□□ -0.38
VAPA-202ENST00000400000 SPRED3Q2MJR0 410 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 ASTLQ6HA08 431 aaPredicted RBP12.71□□□□□ -0.38
VAPA-202ENST00000400000 TMEM179BQ7Z7N9 219 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 ATP13A2Q9NQ11 1180 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 SMCO4Q9NRQ5 59 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 ZNF732B4DXR9 585 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 MMP2P08253 660 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 TAS2R31P59538 309 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 C6orf15Q6UXA7 325 aaPredicted RBP12.71□□□□□ -0.38
VAPA-202ENST00000400000 IDO2Q6ZQW0 420 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 GPR150Q8NGU9 434 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 SPPL3Q8TCT6 385 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 RAB39BQ96DA2 213 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 SPACA5Q96QH8 159 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 SARGQ9BW04 601 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 SMOC1Q9H4F8 434 aa12.71□□□□□ -0.38
VAPA-202ENST00000400000 COA3Q9Y2R0 106 aaPredicted RBP12.71□□□□□ -0.38
VAPA-202ENST00000400000 SERTM1A2A2V5 107 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 GABARAPH6UMI1 98 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 GABARAPO95166 117 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 MAGEB1P43366 347 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 Q6ZTK2 550 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 CCL4L1Q8NHW4 92 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 NTMT1Q9BV86 223 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 AMBRA1Q9C0C7 1298 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 PPA2Q9H2U2 334 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 UBE2ZQ9H832 354 aaPredicted RBP12.7□□□□□ -0.38
VAPA-202ENST00000400000 HRH3Q9Y5N1 445 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 CCSO14618 274 aa12.7□□□□□ -0.38
VAPA-202ENST00000400000 B4GALT3O60512 393 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms