RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ITGA5P08648 1049 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 TLE4Q04727 773 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 CHRNB3Q05901 458 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 MELKQ14680 651 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 LAPTM4AQ15012 233 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 FAM98BQ52LJ0 330 aaKnown RBP17.55■□□□□ 0.4
SNCA-203ENST00000394986 ALKBH2Q6NS38 261 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 SLC35D2Q76EJ3 337 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 RRM2BQ7LG56 351 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 PIWIL3Q7Z3Z3 882 aaKnown RBP17.55■□□□□ 0.4
SNCA-203ENST00000394986 TMEM123Q8N131 208 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 ZNF433Q8N7K0 673 aaPredicted RBP17.55■□□□□ 0.4
SNCA-203ENST00000394986 ANKK1Q8NFD2 765 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 OR51A7Q8NH64 312 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 ZNF347Q96SE7 839 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 SLC24A3Q9HC58 644 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 SLC35F4A4IF30 521 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 AQP12BA6NM10 295 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 SLC43A1O75387 559 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 KRT33AO76009 404 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 BIDP55957 195 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 STK11Q15831 433 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 PHYHD1Q5SRE7 291 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 AQP12AQ8IXF9 295 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 POMGNT2Q8NAT1 580 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 STEAP2Q8NFT2 490 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 CANT1Q8WVQ1 401 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 C14orf79Q96F83 325 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 VNN3Q9NY84 501 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 TAS2R16Q9NYV7 291 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 AURKCQ9UQB9 309 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 DCHS2Q6V1P9 2916 aa17.54■□□□□ 0.4
SNCA-203ENST00000394986 DHRS12A0PJE2 317 aa17.53■□□□□ 0.4
SNCA-203ENST00000394986 SH3PXD2BA1X283 911 aa17.53■□□□□ 0.4
SNCA-203ENST00000394986 AKAP8O43823 692 aaKnown RBP17.53■□□□□ 0.4
SNCA-203ENST00000394986 TSPAN19P0C672 248 aa17.53■□□□□ 0.4
SNCA-203ENST00000394986 CDH2P19022 906 aaPredicted RBP17.53■□□□□ 0.4
SNCA-203ENST00000394986 OMPP47874 163 aa17.53■□□□□ 0.4
SNCA-203ENST00000394986 SMIM11AP58511 58 aa17.53■□□□□ 0.4
SNCA-203ENST00000394986 PPP1R8Q12972 351 aaKnown RBP17.53■□□□□ 0.4
SNCA-203ENST00000394986 CAMK2DQ13557 499 aa17.53■□□□□ 0.4
SNCA-203ENST00000394986 FHL1Q13642 323 aa17.53■□□□□ 0.4
SNCA-203ENST00000394986 IGFN1Q86VF2 1251 aa17.53■□□□□ 0.4
SNCA-203ENST00000394986 CDK20Q8IZL9 346 aa17.53■□□□□ 0.4
SNCA-203ENST00000394986 ALPK1Q96QP1 1244 aa17.53■□□□□ 0.4
SNCA-203ENST00000394986 HDHD5Q9BXW7 423 aa17.53■□□□□ 0.4
SNCA-203ENST00000394986 HIF3AQ9Y2N7 669 aa17.53■□□□□ 0.4
SNCA-203ENST00000394986 CIB4A0PJX0 185 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 A6NNC1 897 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 EBAG9O00559 213 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 CLOCKO15516 846 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 SIAH2O43255 324 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 RAP2AP10114 183 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 SSTR2P30874 369 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 LIMS1P48059 325 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 KRTAP10-9P60411 292 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 RPS4XP62701 263 aaKnown RBP17.52■□□□□ 0.4
SNCA-203ENST00000394986 TMPRSS11FQ6ZWK6 438 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 ASRGL1Q7L266 308 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 OAFQ86UD1 273 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 WFDC8Q8IUA0 241 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 TNFRSF13CQ96RJ3 184 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 GPA33Q99795 319 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 CHID1Q9BWS9 393 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 INIPQ9NRY2 104 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.52■□□□□ 0.4
SNCA-203ENST00000394986 TMEM5Q9Y2B1 443 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 LYVE1Q9Y5Y7 322 aa17.52■□□□□ 0.4
SNCA-203ENST00000394986 ABCA12Q86UK0 2595 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 A0A1W2PR80 420 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 HTR3EA5X5Y0 456 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 ZNF726A6NNF4 738 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 ZNF587BE7ETH6 402 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 M0R3G1 203 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 CASKO14936 926 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 ZNF26P17031 533 aaPredicted RBP17.51■□□□□ 0.39
SNCA-203ENST00000394986 MPGP29372 298 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 ROR2Q01974 943 aaKnown RBP17.51■□□□□ 0.39
SNCA-203ENST00000394986 DAZAP2Q15038 168 aaPredicted RBP17.51■□□□□ 0.39
SNCA-203ENST00000394986 TAB1Q15750 504 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 ALG10Q5BKT4 473 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 TMEM200AQ86VY9 491 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 C20orf196Q8IYI0 205 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 GPR137CQ8N3F9 429 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 ZNF837Q96EG3 531 aaPredicted RBP17.51■□□□□ 0.39
SNCA-203ENST00000394986 LINC00470Q9BZP3 86 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 OR10A4Q9H209 315 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 MCCC2Q9HCC0 563 aa17.51■□□□□ 0.39
SNCA-203ENST00000394986 A0A1W2PRG6 482 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 TCRBV3S1A0A5B6 114 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 OR6C65A6NJZ3 312 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 TNFRSF11BO00300 401 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 OR10H3O60404 316 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 PPP3CBP16298 524 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 CRYGSP22914 178 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 RUNX1T1Q06455 604 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 TOP3AQ13472 1001 aaPredicted RBP17.5■□□□□ 0.39
SNCA-203ENST00000394986 GABRA6Q16445 453 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 ACKR1Q16570 336 aa17.5■□□□□ 0.39
SNCA-203ENST00000394986 ZER1Q7Z7L7 766 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms