RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ZNF627Q7L945 461 aa14.45□□□□□ -0.1
SMARCD1-202ENST00000394963 OR4M2Q8NGB6 313 aa14.45□□□□□ -0.1
SMARCD1-202ENST00000394963 ZNRF4Q8WWF5 429 aa14.45□□□□□ -0.1
SMARCD1-202ENST00000394963 FAM46BQ96A09 425 aa14.45□□□□□ -0.1
SMARCD1-202ENST00000394963 B3GAT2Q9NPZ5 323 aa14.45□□□□□ -0.1
SMARCD1-202ENST00000394963 CEP295Q9C0D2 2601 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 ARL6IP5O75915 188 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 SYPP08247 313 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 PIPP12273 146 aaPredicted RBP14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 ZNF28P17035 718 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 FXYD6P3P58550 94 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 EIF2B1Q14232 305 aaKnown RBP14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 PAMR1Q6UXH9 720 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 TMPRSS11FQ6ZWK6 438 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 VASH1Q7L8A9 365 aaPredicted RBP14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 GPER1Q99527 375 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 CHIAQ9BZP6 476 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 DUSP15Q9H1R2 295 aaPredicted RBP14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 SLC22A13Q9Y226 551 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 TMEM129A0AVI4 362 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 IL33O95760 270 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 HLA-DOBP13765 273 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 CPEP16870 476 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 ITGA3P26006 1051 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 PRSS12P56730 875 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 CLRN1P58418 232 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 SF3A2Q15428 464 aaKnown RBP14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 D2HGDHQ8N465 521 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 MFSD4AQ8N468 514 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 OR5AK2Q8NH90 309 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 DERL3Q96Q80 235 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 RBP7Q96R05 134 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 INTS14Q96SY0 518 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 PRRG4Q9BZD6 226 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 TP63Q9H3D4 680 aaPredicted RBP14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 NUFIP1Q9UHK0 495 aaKnown RBP14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 COPS3Q9UNS2 423 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 BIDP55957 195 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 ACTC1P68032 377 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 ACTA1P68133 377 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 LCN10Q6JVE6 187 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 DHRS13Q6UX07 377 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 UBALD2Q8IYN6 164 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 LRRC18Q8N456 261 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 NPAS1Q99742 590 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 RBM24Q9BX46 236 aaKnown RBP14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 MMP25Q9NPA2 562 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 BOLA1Q9Y3E2 137 aa14.44□□□□□ -0.1
SMARCD1-202ENST00000394963 A0A087WV48 116 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 K7ESF4 209 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 ITGA10O75578 1167 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 FOXF1Q12946 379 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 GALEQ14376 348 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 B3GNTL1Q67FW5 361 aaPredicted RBP14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 KLHL24Q6TFL4 600 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 CPEB2Q7Z5Q1 589 aaKnown RBP14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 OR7G1Q8NGA0 311 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 FAM131CQ96AQ9 280 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 DHRS1Q96LJ7 313 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 B3GALT1Q9Y5Z6 326 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 SULT2B1O00204 365 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 SSNA1O43805 119 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 NOS1APO75052 506 aaPredicted RBP14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 DDAH2O95865 285 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 CEBPEQ15744 281 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 ZNF74Q16587 644 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 DPY19L2P2Q6ZN68 376 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 POGLUT1Q8NBL1 392 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 ZNF721Q8TF20 911 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 TMEM106AQ96A25 262 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 TMEM165Q9HC07 324 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 TFP02787 698 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 YRDCQ86U90 279 aaKnown RBP14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 OR14L1PQ8NHC6 308 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 SLC22A8Q8TCC7 542 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 CHPT1Q8WUD6 406 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 SLC25A46Q96AG3 418 aa14.43□□□□□ -0.1
SMARCD1-202ENST00000394963 ZNHIT1O43257 154 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 TOXO94900 526 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 CER1O95813 267 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 WDPCPO95876 746 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 ZNF43P17038 809 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 DUSP3P51452 185 aaPredicted RBP14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 CHAF1BQ13112 559 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 TMEM164Q5U3C3 297 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 FCRLAQ7L513 359 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 GDPD3Q7L5L3 318 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 TOMM5Q8N4H5 51 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 SPACA5Q96QH8 159 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 WISP1O95388 367 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 IL1AP01583 271 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 HSD11B1P28845 292 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 SPOCK1Q08629 439 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 QSOX2Q6ZRP7 698 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 SLC22A4Q9H015 551 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 MED17Q9NVC6 651 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 A0A1B0GTQ1 180 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 F5H5K5 113 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 ELK1P19419 428 aa14.42□□□□□ -0.1
SMARCD1-202ENST00000394963 FOLR3P41439 243 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms