RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TMEM127O75204 238 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 PMS2P2O95744 297 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 CSF1P09603 554 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 OR8U8P0C7N1 319 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 RBM39Q14498 530 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 ATXN7L3Q14CW9 347 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 KHDRBS2Q5VWX1 349 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 RPL22L1Q6P5R6 122 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 OR5M8Q8NGP6 311 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 HS6ST2Q96MM7 605 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 BBS4Q96RK4 519 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 NRIP2Q9BQI9 281 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 NAA11Q9BSU3 229 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 POFUT1Q9H488 388 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 FKRPQ9H9S5 495 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 MMP26Q9NRE1 261 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 UFSP2Q9NUQ7 469 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 SIDT1Q9NXL6 827 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 OR2AT4A6NND4 320 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 ZNF705EA8MWA4 302 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 GPR37O15354 613 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 TMPRSS11DO60235 418 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 HMGN2P05204 90 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 CD1AP06126 327 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 OR4E1P0C645 316 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 NUBP1P53384 320 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 RGS8P57771 180 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 INPP5JQ15735 1006 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 GFOD2Q3B7J2 385 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 VWA2Q5GFL6 755 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 PRAMEF8Q5VWM4 474 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 PRAMEF7Q5VXH5 474 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 THSD4Q6ZMP0 1018 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 Q6ZVL8 140 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 TCTEX1D2Q8WW35 142 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 C16orf58Q96GQ5 468 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 ZDHHC12Q96GR4 267 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 ZC3H10Q96K80 434 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 MRI1Q9BV20 369 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 EDEM2Q9BV94 578 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 SFXN1Q9H9B4 322 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 TAS2R8Q9NYW2 309 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 SLC7A7Q9UM01 511 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 MOSPD3O75425 235 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 ITGB2P05107 769 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 GYPBP06028 91 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 RHOP08100 348 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 EPCAMP16422 314 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 BMP7P18075 431 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 MAKP20794 623 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 MAGEB1P43366 347 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 MESP2Q0VG99 397 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 AGERQ15109 404 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 LRRC37A5PQ49AS3 106 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 TEX30Q5JUR7 227 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 ENPP7Q6UWV6 458 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 UNQ6126/PRO20091Q6UXV3 157 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 PARGQ86W56 976 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 RNF113BQ8IZP6 322 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 RASGEF1AQ8N9B8 481 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 CYB561A3Q8NBI2 242 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 EDAQ92838 391 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 CLCC1Q96S66 551 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 CD180Q99467 661 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 ZDHHC4Q9NPG8 344 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 LHX9Q9NQ69 397 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 SLC25A13Q9UJS0 675 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 SLC35A3Q9Y2D2 325 aa13.41□□□□□ -0.26
VPS9D1-201ENST00000389386 H7BY64 318 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 FARS2O95363 451 aaKnown RBP13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 EDNRAP25101 427 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 DEFA6Q01524 100 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 PJVKQ0ZLH3 352 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 CCINQ13939 588 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 LIPNQ5VXI9 398 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 HSD11B1LQ7Z5J1 315 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 TMEM200AQ86VY9 491 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 SYS1Q8N2H4 156 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 ARL14Q8N4G2 192 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 MRPL43Q8N983 215 aaKnown RBP13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 OR5AP2Q8NGF4 316 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 OR2A12Q8NGT7 310 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 ZNF764Q96H86 408 aaPredicted RBP13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 SYNPO2LQ9H987 977 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 TMEM27Q9HBJ8 222 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 COMMD9Q9P000 198 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 HS3ST2Q9Y278 367 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 ASF1AQ9Y294 204 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 FAM96BQ9Y3D0 163 aa13.4□□□□□ -0.26
VPS9D1-201ENST00000389386 GGT3PA6NGU5 568 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 C2orf74A8MZ97 194 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 MAN2B1O00754 1011 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 PAPLNO95428 1278 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 LY86O95711 162 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 AKAIN1P0CW23 69 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 GTF2F2P13984 249 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 ANXA11P50995 505 aaKnown RBP13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 PLA2G7Q13093 441 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 CRMP1Q14194 572 aa13.4□□□□□ -0.27
VPS9D1-201ENST00000389386 GRASPQ7Z6J2 395 aaPredicted RBP13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms